Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G172600.1 | Wheat | plastid | 49.47 | 40.7 |
| TraesCS1B01G191700.1 | Wheat | plastid | 49.47 | 40.58 |
| TraesCS1D01G166000.1 | Wheat | plastid | 49.12 | 40.41 |
| Os10t0501900-01 | Rice | plastid | 38.52 | 30.03 |
| Zm00001d013919_P001 | Maize | plastid | 34.98 | 27.27 |
| EER93981 | Sorghum | plastid | 34.28 | 26.22 |
| Zm00001d032535_P002 | Maize | plastid | 32.86 | 26.05 |
| HORVU5Hr1G031990.1 | Barley | nucleus | 4.59 | 11.02 |
| HORVU7Hr1G090280.1 | Barley | mitochondrion | 10.25 | 10.07 |
| HORVU2Hr1G088520.1 | Barley | cytosol, nucleus, plastid | 9.89 | 9.4 |
| HORVU4Hr1G084230.1 | Barley | mitochondrion, plastid | 10.95 | 9.09 |
| HORVU3Hr1G084970.2 | Barley | plastid | 13.43 | 7.87 |
| HORVU1Hr1G073460.2 | Barley | plastid | 13.07 | 7.23 |
| HORVU1Hr1G050780.2 | Barley | plastid | 7.77 | 5.77 |
| HORVU1Hr1G073400.1 | Barley | endoplasmic reticulum | 4.95 | 4.38 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G045530.3 | EnsemblPlantsGene:HORVU1Hr1G045530 | PANTHER:PTHR26312 | PANTHER:PTHR26312:SF77 | SEG:seg | UniParc:UPI000B46FFCB |
| UniProt:A0A287FDJ4 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr1H:-:330766222..330771497
Molecular Weight (calculated)
31307.9 Da
IEP (calculated)
6.432
GRAVY (calculated)
-0.714
Length
283 amino acids
Sequence
(BLAST)
(BLAST)
001: QKVHFESPDL AVGLLGIVAS CLGTAVEMEM ERIRAKEADE SASKAKATAV DDDDDGEDDA EEDLPMLVGL DVEKELWARI GIHHEEDDDM PLGVDDDEQE
101: AIDAARAGIR KAAYERIIAT SEANSLILSN YAQLLYEFDK DLDRQGGGLL QACGGHRAAR RRGDAEVRGV PLASPRRPGR RGGHVHGRHR RGAGQQPPPE
201: QLRVVPLDDR WRGDLRHRLR QQLRQQQRNR MKPIAGTSSA TRDLISSQRQ LKTDLTGRCP AVPARLPAVL DGASRHILRT VRE
101: AIDAARAGIR KAAYERIIAT SEANSLILSN YAQLLYEFDK DLDRQGGGLL QACGGHRAAR RRGDAEVRGV PLASPRRPGR RGGHVHGRHR RGAGQQPPPE
201: QLRVVPLDDR WRGDLRHRLR QQLRQQQRNR MKPIAGTSSA TRDLISSQRQ LKTDLTGRCP AVPARLPAVL DGASRHILRT VRE
001: MALRRLSKSV SSAIKAQYTL SRPSPLLRSR SLSSSPHYTS IGRPTNSFIG KINNSSITHA TTTHGQLFPL SSPRRFCTTT AQVNQNEFTE MAWEGLINAF
101: DAARESKQQI VESEHLMKAL LEQKDGMARK IFTKAGIDNS SVLQATDLFI SKQPTVSDAS GQRLGSSLSV ILENAKRHKK DMLDSYVSVE HFLLAYYSDT
201: RFGQEFFRDM KLDIQVLKDA IKDVRGDQRV TDRNPESKYQ ALEKYGNDLT EMARRGKLDP VIGRDDEIRR CIQILCRRTK NNPVIIGEPG VGKTAIAEGL
301: AQRIVRGDVP EPLMNRKLIS LDMGSLLAGA KFRGDFEERL KAVMKEVSAS NGQTILFIDE IHTVVGAGAM DGAMDASNLL KPMLGRGELR CIGATTLTEY
401: RKYIEKDPAL ERRFQQVLCV QPSVEDTISI LRGLRERYEL HHGVTISDSA LVSAAVLADR YITERFLPDK AIDLVDEAGA KLKMEITSKP TELDGIDRAV
501: IKLEMEKLSL KNDTDKASKE RLQKIENDLS TLKQKQKELN VQWEKEKSLM TKIRSFKEEI DRVNLEIESA EREYDLNRAA ELKYGTLLSL QRQLEEAEKN
601: LTNFRQFGQS LLREVVTDLD IAEIVSKWTG IPLSNLQQSE REKLVMLEEV LHHRVIGQDM AVKSVADAIR RSRAGLSDPN RPIASFMFMG PTGVGKTELA
701: KALAGYLFNT ENAIVRVDMS EYMEKHSVSR LVGAPPGYVG YEEGGQLTEV VRRRPYSVVL FDEIEKAHPD VFNILLQLLD DGRITDSQGR TVSFKNCVVI
801: MTSNIGSHHI LETLRNNEDS KEAVYEIMKR QVVELARQNF RPEFMNRIDE YIVFQPLDSN EISKIVELQM RRVKNSLEQK KIKLQYTKEA VDLLAQLGFD
901: PNYGARPVKR VIQQMVENEI AVGILKGDFA EEDTVLVDVD HLASDNKLVI KKLESNASAE EMAA
101: DAARESKQQI VESEHLMKAL LEQKDGMARK IFTKAGIDNS SVLQATDLFI SKQPTVSDAS GQRLGSSLSV ILENAKRHKK DMLDSYVSVE HFLLAYYSDT
201: RFGQEFFRDM KLDIQVLKDA IKDVRGDQRV TDRNPESKYQ ALEKYGNDLT EMARRGKLDP VIGRDDEIRR CIQILCRRTK NNPVIIGEPG VGKTAIAEGL
301: AQRIVRGDVP EPLMNRKLIS LDMGSLLAGA KFRGDFEERL KAVMKEVSAS NGQTILFIDE IHTVVGAGAM DGAMDASNLL KPMLGRGELR CIGATTLTEY
401: RKYIEKDPAL ERRFQQVLCV QPSVEDTISI LRGLRERYEL HHGVTISDSA LVSAAVLADR YITERFLPDK AIDLVDEAGA KLKMEITSKP TELDGIDRAV
501: IKLEMEKLSL KNDTDKASKE RLQKIENDLS TLKQKQKELN VQWEKEKSLM TKIRSFKEEI DRVNLEIESA EREYDLNRAA ELKYGTLLSL QRQLEEAEKN
601: LTNFRQFGQS LLREVVTDLD IAEIVSKWTG IPLSNLQQSE REKLVMLEEV LHHRVIGQDM AVKSVADAIR RSRAGLSDPN RPIASFMFMG PTGVGKTELA
701: KALAGYLFNT ENAIVRVDMS EYMEKHSVSR LVGAPPGYVG YEEGGQLTEV VRRRPYSVVL FDEIEKAHPD VFNILLQLLD DGRITDSQGR TVSFKNCVVI
801: MTSNIGSHHI LETLRNNEDS KEAVYEIMKR QVVELARQNF RPEFMNRIDE YIVFQPLDSN EISKIVELQM RRVKNSLEQK KIKLQYTKEA VDLLAQLGFD
901: PNYGARPVKR VIQQMVENEI AVGILKGDFA EEDTVLVDVD HLASDNKLVI KKLESNASAE EMAA
Arabidopsis Description
CLPB4Chaperone protein ClpB4, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8VYJ7]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.