Factsheet for HORVU3Hr1G084970.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G400100.1	Wheat	plastid	94.62	95.41
TraesCS3D01G361500.1	Wheat	plastid	94.41	95.0
TraesCS3A01G368600.1	Wheat	plastid	93.17	93.56
Os01t0855200-01	Rice	plastid	80.33	75.78
Zm00001d042812_P001	Maize	plastid	73.08	67.5
Zm00001d012325_P001	Maize	plastid	72.05	67.44
EES01775	Sorghum	plastid	71.84	65.47
HORVU1Hr1G073460.2	Barley	plastid	61.28	57.81
CDY02002	Canola	cytosol, mitochondrion, nucleus	16.56	52.63
GSMUA_Achr9P03650_001	Banana	plastid	49.69	47.34
GSMUA_Achr8P02280_001	Banana	plastid	48.45	46.8
GSMUA_Achr11P...	Banana	plastid	46.79	45.29
GSMUA_Achr6P33690_001	Banana	plastid	49.69	44.94
Bra018368.1-P	Field mustard	plastid	41.61	43.04
VIT_06s0004g06290.t01	Wine grape	plastid	45.96	41.97
HORVU1Hr1G073400.1	Barley	endoplasmic reticulum	27.54	41.56
CDY51354	Canola	plastid	41.41	41.49
KRG98335	Soybean	plastid	45.34	41.17
Bra039995.1-P	Field mustard	plastid	41.41	41.15
CDX97868	Canola	plastid	42.44	40.84
AT2G29670.2	Thale cress	plastid	44.93	40.49
Bra031567.1-P	Field mustard	plastid	41.41	40.4
CDY06247	Canola	plastid	41.41	40.4
KRH46437	Soybean	plastid	43.48	40.0
Bra015570.1-P	Field mustard	plastid	42.44	39.88
Solyc06g076850.2.1	Tomato	plastid	45.34	39.75
CDY06694	Canola	plastid	42.24	39.69
CDY10264	Canola	plastid	42.44	39.65
PGSC0003DMT400078227	Potato	plastid	45.34	39.6
CDY09927	Canola	plastid	39.75	38.79
GSMUA_Achr5P28840_001	Banana	cytosol	44.72	38.5
AT1G07280.1	Thale cress	plastid	42.03	36.78
CDX99068	Canola	plastid	33.95	35.81
Bra018168.1-P	Field mustard	plastid	33.95	35.81
Bra019495.1-P	Field mustard	plastid	33.95	35.42
CDX86126	Canola	plastid	35.2	34.98
CDY58299	Canola	plastid	34.58	34.43
CDY38075	Canola	plastid	29.81	33.96
AT3G47080.1	Thale cress	plastid	36.02	33.79
HORVU5Hr1G031990.1	Barley	nucleus	6.42	26.27
HORVU7Hr1G090280.1	Barley	mitochondrion	13.04	21.88
HORVU2Hr1G088520.1	Barley	cytosol, nucleus, plastid	12.84	20.81
HORVU4Hr1G084230.1	Barley	mitochondrion, plastid	13.04	18.48
HORVU1Hr1G050780.2	Barley	plastid	12.22	15.49
HORVU1Hr1G045530.3	Barley	cytosol	7.87	13.43

Protein Annotations

EnsemblPlants:HORVU3Hr1G084970.2	EnsemblPlantsGene:HORVU3Hr1G084970	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR011990	InterPro:IPR013026	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR26312	PANTHER:PTHR26312:SF83
PFscan:PS50293	SEG:seg	SUPFAM:SSF48452	UniParc:UPI000B4754C1	UniProt:A0A287M147	MapMan:35.2

Description

No Description!

Coordinates

chrchr3H:-:610608101..610610773

Molecular Weight (calculated)

52316.4 Da

IEP (calculated)

5.111

GRAVY (calculated)

-0.242

Length

483 amino acids

Sequence
(BLAST)

001: MGIQVASSSP SSSLGAGCMS LSRAQSSSSS SLAAWSVGIA RRRAGHAMVT RALSASIDSV GSHGGDDEEF LRRIQELAVG LHPGAGGCGW PASVERSASS
101: VGLPLSLRML KRKKRQQWQR SRWNDRLPDR AGESGRGAVG RAFSSMVLII RELQSFALQM RQALFYEDMQ SVLARVHAEM DASFVWLFQH IFAGTPALMV
201: SVMLLLANFT VYSMGDNIAM AANLPPPQPT VAAVAMLDAQ HAEQSRPDQR FDSVSLKLNS FSIGRTASVD GSSGGGGKAR PVAGATGDDR SDESCYRQSG
301: AVLPQDESQA TPVGAAAEDT EDELVIWRRI AEEATRMQAS VRVEALMDPD ILGQLVAPVE AKLDTEDLAD YARTEQRYAM AVSEEPSNAL LLANFAQFLY
401: LVQRDHDRAE HYFKRAVRAE QPADAETLGW YATFLWKARD DLAAAEETFQ EAIAAEPSNG HHAAAYAHFL WNTGGEDTCY PLD

Best Arabidopsis Sequence Match ( AT2G29670.2 )
(BLAST)

001: MGVKVASSST FLQWTTQPII HQSSSPSQTL ASGTITSPSK RRSTVHDGRF LSCRFVTQRL NRSALFGTPS TKLHRPKSCE LWKSSSSSSR PIKTQSFRRV
101: YSANLDPFSD EEFSKKIQEL TLRFNIPHHD DDENSIEPPW NEMVHLSSIE MKANSVDLPL SLRIIKKKRQ WEEGVKQAGE SACCSMNKAF SSMVFMIREL
201: QSFTLHMREI LFYEDLQEIL LRVREEMQQS FVWLFQQVFS ATPTLMVYVM ILLANFTVYS IGNNSSALAA VAPLPPTITE LTTVSETEET NVKFDSSVVK
301: TFFVSSPSGS IASVGGNNNG GGGNVKPVLS GTDGDGSDGS EQFRTIIPEG VSQLSSSNFG SEPSVSGQDE HRLWNSMVEE AERMQYSNID DSLDQETRKR
401: FVSHVEARVE AEEDTGYFKT ELMYQTELSQ EPNNPLLLAN YAQFLYLVSN DHDRAEEYFK RAVGVEPKDA EAFSKYATFL WRARDDLWAA EETFLEAIDA
501: DPTNSYYAAN YANFLWNTGG DDTCFPLDDE SHEDTI

Arabidopsis Description

At2g29670/T27A16.23 [Source:UniProtKB/TrEMBL;Acc:O82388]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.