Factsheet for HORVU1Hr1G073460.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G277900.1	Wheat	plastid	82.42	89.03
TraesCS1B01G287500.1	Wheat	plastid	83.2	88.94
TraesCS1A01G278600.1	Wheat	plastid	80.47	87.66
Os05t0447700-01	Rice	plastid	72.46	76.65
KXG22120	Sorghum	plastid	68.16	68.43
Zm00001d038274_P002	Maize	plastid	66.41	67.73
HORVU1Hr1G073400.1	Barley	endoplasmic reticulum	40.82	65.31
Zm00001d010075_P001	Maize	plastid	64.26	62.67
HORVU3Hr1G084970.2	Barley	plastid	57.81	61.28
CDY02002	Canola	cytosol, mitochondrion, nucleus	15.62	52.63
GSMUA_Achr9P03650_001	Banana	plastid	44.14	44.58
GSMUA_Achr8P02280_001	Banana	plastid	42.97	44.0
GSMUA_Achr11P...	Banana	plastid	41.21	42.28
GSMUA_Achr6P33690_001	Banana	plastid	43.75	41.95
CDY51354	Canola	plastid	38.48	40.87
Bra018368.1-P	Field mustard	plastid	37.11	40.69
Bra039995.1-P	Field mustard	plastid	38.48	40.53
CDX97868	Canola	plastid	39.65	40.44
VIT_06s0004g06290.t01	Wine grape	plastid	41.6	40.26
KRG98335	Soybean	plastid	41.41	39.85
KRH46437	Soybean	plastid	40.23	39.24
Bra015570.1-P	Field mustard	plastid	38.48	38.33
AT2G29670.2	Thale cress	plastid	40.04	38.25
CDY06694	Canola	plastid	38.28	38.13
Bra031567.1-P	Field mustard	plastid	36.72	37.98
CDY06247	Canola	plastid	36.72	37.98
CDY10264	Canola	plastid	38.28	37.91
Solyc06g076850.2.1	Tomato	plastid	40.43	37.57
PGSC0003DMT400078227	Potato	plastid	40.23	37.25
CDY09927	Canola	plastid	35.55	36.77
AT1G07280.1	Thale cress	plastid	39.06	36.23
GSMUA_Achr5P28840_001	Banana	cytosol	38.48	35.12
Bra018168.1-P	Field mustard	plastid	31.05	34.72
CDX99068	Canola	plastid	31.05	34.72
CDX86126	Canola	plastid	32.03	33.74
Bra019495.1-P	Field mustard	plastid	29.88	33.05
CDY38075	Canola	plastid	26.76	32.31
AT3G47080.1	Thale cress	plastid	32.42	32.23
CDY58299	Canola	plastid	30.47	32.16
HORVU5Hr1G031990.1	Barley	nucleus	6.25	27.12
HORVU7Hr1G090280.1	Barley	mitochondrion	13.09	23.26
HORVU4Hr1G084230.1	Barley	mitochondrion, plastid	13.48	20.23
HORVU2Hr1G088520.1	Barley	cytosol, nucleus, plastid	11.72	20.13
HORVU1Hr1G050780.2	Barley	plastid	9.77	13.12
HORVU1Hr1G045530.3	Barley	cytosol	7.23	13.07

Protein Annotations

EnsemblPlants:HORVU1Hr1G073460.2	EnsemblPlantsGene:HORVU1Hr1G073460	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR011990
InterPro:IPR013026	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	ncoils:Coil	PANTHER:PTHR26312	PANTHER:PTHR26312:SF83
PFAM:PF14559	PFscan:PS50293	SEG:seg	SUPFAM:SSF48452	UniParc:UPI00029654A8	UniProt:M0Z9E5
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:503312082..503313620

Molecular Weight (calculated)

54750.4 Da

IEP (calculated)

4.891

GRAVY (calculated)

-0.117

Length

512 amino acids

Sequence
(BLAST)

001: MGFQVAAVVP SPCAPSSAPS TSSRSPFLGG GCGMLVRSSA PGGLVARRRG EGRPARCALS ASIDGTGGGD LEFLRRIEEL AASAGARTAG CGWPPSLERS
101: ASAVGLPLSL RMLKRKKKQQ QVAPRSRWDE RLLLGSAGES VGRAFSSMVL IVQELQSFAL QQMQEALLCD DLQGVLARAH GEMHASFVWL FQHIFAATPA
201: LMLSLMLLLA NFSVHSMSHS VAAAAVSPTL PAAAAATLVD AQHNEPSNPR FDAVSVKTFS SGRTASVGGG SGGGGDVRPV AGASSDDRWD ESRYSLNRVA
301: PQQLAPLAGM GADAAAVDEQ AIWDRMAAEA SSMQADARAD ELTDPSVLGS LVAPVEAEIE TEDVGEYART EQGYELAVSE EPNNSLILAN FAQFLYLTRK
401: DHTRYALGHA HQLFDETPLQ LFLFLPWLLI SQLRVDRRAE HYFERAVQAE PTDAEALSRY ATFLWKARDD VEAAEETYQE AIAADPGNAH YAAAYAHFLW
501: NTGGEDTCFP LD

Best Arabidopsis Sequence Match ( AT2G29670.2 )
(BLAST)

001: MGVKVASSST FLQWTTQPII HQSSSPSQTL ASGTITSPSK RRSTVHDGRF LSCRFVTQRL NRSALFGTPS TKLHRPKSCE LWKSSSSSSR PIKTQSFRRV
101: YSANLDPFSD EEFSKKIQEL TLRFNIPHHD DDENSIEPPW NEMVHLSSIE MKANSVDLPL SLRIIKKKRQ WEEGVKQAGE SACCSMNKAF SSMVFMIREL
201: QSFTLHMREI LFYEDLQEIL LRVREEMQQS FVWLFQQVFS ATPTLMVYVM ILLANFTVYS IGNNSSALAA VAPLPPTITE LTTVSETEET NVKFDSSVVK
301: TFFVSSPSGS IASVGGNNNG GGGNVKPVLS GTDGDGSDGS EQFRTIIPEG VSQLSSSNFG SEPSVSGQDE HRLWNSMVEE AERMQYSNID DSLDQETRKR
401: FVSHVEARVE AEEDTGYFKT ELMYQTELSQ EPNNPLLLAN YAQFLYLVSN DHDRAEEYFK RAVGVEPKDA EAFSKYATFL WRARDDLWAA EETFLEAIDA
501: DPTNSYYAAN YANFLWNTGG DDTCFPLDDE SHEDTI

Arabidopsis Description

At2g29670/T27A16.23 [Source:UniProtKB/TrEMBL;Acc:O82388]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.