Factsheet for GSMUA_Achr6P33690_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P03650_001	Banana	plastid	69.66	73.37
GSMUA_Achr8P02280_001	Banana	plastid	63.67	68.0
GSMUA_Achr11P...	Banana	plastid	59.93	64.13
CDY02002	Canola	cytosol, mitochondrion, nucleus	16.48	57.89
GSMUA_Achr5P28840_001	Banana	cytosol	57.87	55.08
Os01t0855200-01	Rice	plastid	48.13	50.2
HORVU3Hr1G084970.2	Barley	plastid	44.94	49.69
TraesCS3B01G400100.1	Wheat	plastid	44.57	49.69
TraesCS3D01G361500.1	Wheat	plastid	44.38	49.38
TraesCS3A01G368600.1	Wheat	plastid	44.01	48.86
Os05t0447700-01	Rice	plastid	44.19	48.76
TraesCS1D01G277900.1	Wheat	plastid	42.7	48.1
Zm00001d012325_P001	Maize	plastid	46.44	48.06
TraesCS1B01G287500.1	Wheat	plastid	42.7	47.6
TraesCS1A01G278600.1	Wheat	plastid	41.76	47.45
Zm00001d042812_P001	Maize	plastid	46.44	47.42
VIT_06s0004g06290.t01	Wine grape	plastid	46.44	46.88
EES01775	Sorghum	plastid	46.25	46.6
KRG98335	Soybean	plastid	46.07	46.24
CDY51354	Canola	plastid	41.57	46.06
Bra018368.1-P	Field mustard	plastid	40.26	46.04
Bra039995.1-P	Field mustard	plastid	41.76	45.88
KRH46437	Soybean	plastid	44.57	45.33
Zm00001d038274_P002	Maize	plastid	42.51	45.22
CDX97868	Canola	plastid	42.13	44.82
KXG22120	Sorghum	plastid	42.7	44.71
AT2G29670.2	Thale cress	plastid	44.38	44.22
HORVU1Hr1G073460.2	Barley	plastid	41.95	43.75
Bra015570.1-P	Field mustard	plastid	41.95	43.58
CDY06694	Canola	plastid	41.95	43.58
Solyc06g076850.2.1	Tomato	plastid	44.94	43.56
CDY10264	Canola	plastid	42.13	43.52
Zm00001d010075_P001	Maize	plastid	42.7	43.43
Bra031567.1-P	Field mustard	plastid	40.07	43.23
CDY06247	Canola	plastid	40.07	43.23
PGSC0003DMT400078227	Potato	plastid	44.19	42.68
CDY09927	Canola	plastid	38.95	42.02
AT1G07280.1	Thale cress	plastid	42.13	40.76
CDX99068	Canola	plastid	32.77	38.21
Bra018168.1-P	Field mustard	plastid	32.77	38.21
CDX86126	Canola	plastid	33.52	36.83
Bra019495.1-P	Field mustard	plastid	31.65	36.5
AT3G47080.1	Thale cress	plastid	34.83	36.12
CDY58299	Canola	plastid	32.4	35.67
CDY38075	Canola	plastid	27.72	34.91
GSMUA_Achr2P15930_001	Banana	cytosol	7.12	31.67
GSMUA_Achr4P27320_001	Banana	plastid	12.55	25.28
GSMUA_Achr5P03500_001	Banana	plastid	11.61	24.9
GSMUA_Achr1P01000_001	Banana	plastid	11.24	22.14
GSMUA_Achr5P15660_001	Banana	plastid	10.3	18.97

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.2	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSMUA_Achr6G33690_001
EnsemblPlants:GSMUA_Achr6P33690_001	EnsemblPlants:GSMUA_Achr6T33690_001	InterPro:IPR011990	InterPro:IPR013026	UniProt:M0TCG2	PFAM:PF13431
PFscan:PS50293	PANTHER:PTHR26312	PANTHER:PTHR26312:SF83	SUPFAM:SSF48452	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf
UniParc:UPI00029668AB	SEG:seg	:	:	:	:

Description

Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G33690_001]

Coordinates

chr6:+:32630111..32632152

Molecular Weight (calculated)

59309.5 Da

IEP (calculated)

4.620

GRAVY (calculated)

-0.349

Length

534 amino acids

Sequence
(BLAST)

001: MEVQVTGACS PLSHLSPTNS LTAFQVAFGL PFGSSKRKGA AARGCDCVLT PPVLGAPSPR LSRARSLEIL WGRGRRAQEQ ALRRAFSVDR FASDGDDDEV
101: EEEEFVQRFE ELPLELRQHQ RDGNEDSVVA CSESWSSQEG VALPTSACFS SDTSPPPDWS DQIVPASVEM NANSVELPLS LRIIKRKKQC EDRWFREAGG
201: TACCSVKRAF SSMVFMIREL QSYTLQMREV LFREDLQGIL ARVQREMNSS FVWLFQQIFS CTPTLMLSVM LLLANFTVYS MDNLDGAAAT ATPKPPTQQS
301: LFETVMVEDH RQSHHERYLV VKTISSILGG SGVGGGGKTR PVAGATGDGR SDDKSSSDQT ILPDSVSRAW KGILEEVSRM QASTRDAALM DPATLRLFVS
401: PVAVELEHDD YSEYLRTEFM YQQALSQDPD NALLLANFAQ FLYLVRHDHD RAEYYFKRAA KSVPADAEAL SRYATFLWLS RKDLEAAEET YLEAIDADPG
501: NTFHAANYAH FLWNTGGEDT CYPLDDGNGD DDAF

Best Arabidopsis Sequence Match ( AT1G07280.2 )
(BLAST)

001: MGVKVATSST FHQWVAHPIV HHSSSLSQTL ASSAVSSPSR RRIIGNDGRS SLSCRSVMQS QRLNPSSPFG TSSTNLRHSK SCELWESTKR PKTQLIRRAF
101: SANVDPFSEE EFAKKMQELT LKFQVSNEEE DNESDTRIDD YTRKMDIVGS HNNFRSDSME PPWPEMVQMS NIERKANSVD LPLSLRIIKR KLQMEEGVLN
201: QVGESACCSV KKAFSSMVFM IRELQSFTLH MRELLLFEDL QGILHRVRKE MQASFVWLFQ QVFSATPTLM VSVMILLANF TVYSIESNSA LAAAVSPPTT
301: LSFSFETTAE ISETQETNQK FDSSMVKTFS VSSPYGKTSF VGGGGGNNIP PPVQSGTDGD GSDQFRKSQF SSSSLGATSA DSDVSVSGQE EIRLWNSILE
401: ETAKMETLDH ETMKGMVSPV EARLEAEESM DYFKTELLYQ TGLSQEPGNV LLLANYAQFL YLIIHDYDRA EKYFKRAAKA EPADAEALNK YATFLWRARN
501: DIWRAEETYL EAISADPTNS VYSANYAHFL WNTGGDETCF PLDAPSQQNN TT

Arabidopsis Description

At1g07280/F22G5_32 [Source:UniProtKB/TrEMBL;Acc:Q8VZC8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.