Factsheet for Bra018368.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02002	Canola	cytosol, mitochondrion, nucleus	30.62	94.08
Bra039995.1-P	Field mustard	plastid	77.09	74.07
AT2G29670.2	Thale cress	plastid	78.37	68.28
Bra015570.1-P	Field mustard	plastid	64.03	58.17
Bra031567.1-P	Field mustard	plastid	59.1	55.76
VIT_06s0004g06290.t01	Wine grape	plastid	59.53	52.55
KRG98335	Soybean	plastid	56.32	49.44
KRH46437	Soybean	plastid	55.25	49.14
Solyc06g076850.2.1	Tomato	plastid	55.46	47.01
Bra018168.1-P	Field mustard	plastid	46.04	46.94
PGSC0003DMT400078227	Potato	plastid	55.46	46.84
Bra019495.1-P	Field mustard	plastid	45.4	45.79
GSMUA_Achr8P02280_001	Banana	plastid	46.04	43.0
TraesCS3B01G400100.1	Wheat	plastid	42.83	41.75
HORVU3Hr1G084970.2	Barley	plastid	43.04	41.61
TraesCS3D01G361500.1	Wheat	plastid	42.61	41.46
TraesCS3A01G368600.1	Wheat	plastid	42.61	41.37
GSMUA_Achr9P03650_001	Banana	plastid	44.75	41.22
Os01t0855200-01	Rice	plastid	45.18	41.21
Os05t0447700-01	Rice	plastid	42.61	41.12
GSMUA_Achr6P33690_001	Banana	plastid	46.04	40.26
TraesCS1B01G287500.1	Wheat	plastid	41.11	40.08
TraesCS1D01G277900.1	Wheat	plastid	40.47	39.87
GSMUA_Achr11P...	Banana	plastid	42.4	39.68
TraesCS1A01G278600.1	Wheat	plastid	39.83	39.57
Zm00001d012325_P001	Maize	plastid	43.25	39.15
Zm00001d042812_P001	Maize	plastid	43.68	39.01
EES01775	Sorghum	plastid	43.9	38.68
HORVU1Hr1G073460.2	Barley	plastid	40.69	37.11
KXG22120	Sorghum	plastid	40.26	36.86
Zm00001d038274_P002	Maize	plastid	39.4	36.65
Zm00001d010075_P001	Maize	plastid	40.04	35.62
GSMUA_Achr5P28840_001	Banana	cytosol	41.33	34.4
Bra020090.1-P	Field mustard	cytosol	11.56	27.84
Bra013269.1-P	Field mustard	mitochondrion	12.21	24.89
Bra021028.1-P	Field mustard	plastid	13.28	23.57
Bra006547.1-P	Field mustard	plastid	13.49	23.08
Bra011339.1-P	Field mustard	plastid	11.78	22.54
Bra002280.1-P	Field mustard	plastid	13.49	22.18
Bra035194.1-P	Field mustard	nucleus	12.21	18.63
Bra008495.1-P	Field mustard	mitochondrion, nucleus	11.56	17.88
Bra015324.1-P	Field mustard	nucleus	11.56	16.93

Protein Annotations

EnsemblPlants:Bra018368.1	EnsemblPlants:Bra018368.1-P	EnsemblPlantsGene:Bra018368	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR011990	InterPro:IPR013026	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR26312
PANTHER:PTHR26312:SF83	PFscan:PS50293	SEG:seg	SUPFAM:SSF48452	UniParc:UPI0002547C93	UniProt:M4DPC7
MapMan:35.2	:	:	:	:	:

Description

AT2G29670 (E=5e-172) | binding

Coordinates

chrA05:+:7792317..7796191

Molecular Weight (calculated)

52270.2 Da

IEP (calculated)

4.568

GRAVY (calculated)

-0.291

Length

467 amino acids

Sequence
(BLAST)

001: MGVKVAPYTS PFLQWASSSQ TLASGAISSR RQRLNRPSLF GTPLLYGSKS CELSKPTKTQ SFRRVSSASF SDEEFSKKIQ ELTLRFNHER DANEMVHLSS
101: IEMKANSVHL PLSLRIIKKK PQWDEGVKQA ACDSMSKAFS SMVSMIQELQ SFTLHMRETL FYQDLQGILV RVREEMHASF VWLFRQVFSA TPTLMVYVML
201: LLANFTVYSL GANSALAAAA TPTSTVAEVA TVSETNDKID SSVVKSFFIP SPTVDGSNNG GGGNIRPVLS GTDGDGFDVP EGPSRLSSST FGSTISTETS
301: VSGQDEVRLW NSIVEEAEEM QYNVLDHETR KWFVSPLDAR VEAEKDIDFF RTELLYQTGL SQEPDNPLLL VNYAQFLYIV SYDYDRAEEY FKRAVGVEPK
401: DAEALSKYAT FLWRARDDLW AAEETFLEAI DADPTNSFYA ANYANFLWNT GGDETCFPLE ESHEDNI

Best Arabidopsis Sequence Match ( AT2G29670.2 )
(BLAST)

001: MGVKVASSST FLQWTTQPII HQSSSPSQTL ASGTITSPSK RRSTVHDGRF LSCRFVTQRL NRSALFGTPS TKLHRPKSCE LWKSSSSSSR PIKTQSFRRV
101: YSANLDPFSD EEFSKKIQEL TLRFNIPHHD DDENSIEPPW NEMVHLSSIE MKANSVDLPL SLRIIKKKRQ WEEGVKQAGE SACCSMNKAF SSMVFMIREL
201: QSFTLHMREI LFYEDLQEIL LRVREEMQQS FVWLFQQVFS ATPTLMVYVM ILLANFTVYS IGNNSSALAA VAPLPPTITE LTTVSETEET NVKFDSSVVK
301: TFFVSSPSGS IASVGGNNNG GGGNVKPVLS GTDGDGSDGS EQFRTIIPEG VSQLSSSNFG SEPSVSGQDE HRLWNSMVEE AERMQYSNID DSLDQETRKR
401: FVSHVEARVE AEEDTGYFKT ELMYQTELSQ EPNNPLLLAN YAQFLYLVSN DHDRAEEYFK RAVGVEPKDA EAFSKYATFL WRARDDLWAA EETFLEAIDA
501: DPTNSYYAAN YANFLWNTGG DDTCFPLDDE SHEDTI

Arabidopsis Description

At2g29670/T27A16.23 [Source:UniProtKB/TrEMBL;Acc:O82388]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.