Factsheet for Bra031567.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06247	Canola	plastid	100.0	100.0
Bra015570.1-P	Field mustard	plastid	76.97	74.12
AT1G07280.1	Thale cress	plastid	78.99	70.83
Bra018368.1-P	Field mustard	plastid	55.76	59.1
Bra039995.1-P	Field mustard	plastid	55.15	56.17
VIT_06s0004g06290.t01	Wine grape	plastid	54.34	50.85
KRH46437	Soybean	plastid	52.32	49.33
KRG98335	Soybean	plastid	52.73	49.06
Solyc06g076850.2.1	Tomato	plastid	52.73	47.37
PGSC0003DMT400078227	Potato	plastid	52.53	47.02
Bra018168.1-P	Field mustard	plastid	42.02	45.41
Bra019495.1-P	Field mustard	plastid	40.4	43.2
GSMUA_Achr8P02280_001	Banana	plastid	43.03	42.6
TraesCS3D01G361500.1	Wheat	plastid	40.61	41.88
GSMUA_Achr9P03650_001	Banana	plastid	42.83	41.81
TraesCS3A01G368600.1	Wheat	plastid	40.61	41.79
TraesCS3B01G400100.1	Wheat	plastid	40.4	41.75
HORVU3Hr1G084970.2	Barley	plastid	40.4	41.41
Os01t0855200-01	Rice	plastid	42.83	41.41
GSMUA_Achr6P33690_001	Banana	plastid	43.23	40.07
GSMUA_Achr11P...	Banana	plastid	40.2	39.88
Zm00001d012325_P001	Maize	plastid	41.21	39.53
Os05t0447700-01	Rice	plastid	38.38	39.26
TraesCS1B01G287500.1	Wheat	plastid	37.98	39.25
Zm00001d042812_P001	Maize	plastid	41.41	39.2
EES01775	Sorghum	plastid	41.82	39.06
TraesCS1A01G278600.1	Wheat	plastid	36.97	38.94
TraesCS1D01G277900.1	Wheat	plastid	36.97	38.61
KXG22120	Sorghum	plastid	38.59	37.45
HORVU1Hr1G073460.2	Barley	plastid	37.98	36.72
Zm00001d038274_P002	Maize	plastid	36.97	36.45
Zm00001d010075_P001	Maize	plastid	37.98	35.81
GSMUA_Achr5P28840_001	Banana	cytosol	40.0	35.29
Bra020090.1-P	Field mustard	cytosol	10.71	27.32
Bra013269.1-P	Field mustard	mitochondrion	11.72	25.33
Bra021028.1-P	Field mustard	plastid	12.93	24.33
Bra011339.1-P	Field mustard	plastid	10.91	22.13
Bra002280.1-P	Field mustard	plastid	12.12	21.13
Bra006547.1-P	Field mustard	plastid	11.52	20.88
Bra035194.1-P	Field mustard	nucleus	11.52	18.63
Bra008495.1-P	Field mustard	mitochondrion, nucleus	10.71	17.55
Bra015324.1-P	Field mustard	nucleus	10.71	16.61

Protein Annotations

EnsemblPlants:Bra031567.1	EnsemblPlants:Bra031567.1-P	EnsemblPlantsGene:Bra031567	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR011990	InterPro:IPR013026	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR26312
PANTHER:PTHR26312:SF83	PFscan:PS50293	SEG:seg	SUPFAM:SSF48452	UniParc:UPI0002543437	UniProt:M4ERY9
MapMan:35.2	:	:	:	:	:

Description

AT1G07280 (E=4e-188) | binding

Coordinates

chrA09:-:35798860..35801490

Molecular Weight (calculated)

55847.9 Da

IEP (calculated)

5.619

GRAVY (calculated)

-0.382

Length

495 amino acids

Sequence
(BLAST)

001: MGMKIATTST LHQCVAHHSS SLSQTLSSST VSSLSKRRSI GNNGRSLSCE LWESSRHTKT HLLRRAFSTS VDPFSEEEFS KKMQELSLKF QVSNEEDNDI
101: FGSHDFSIMD TMKPPWHETV QMSTIERKAN SVELPLSLRI IKRKLKMEEE VIKQVGESSA VKRAFSSMVF MIRELQSFTL HMRELLLFED LQGVLLRVRK
201: EMHASFVWLF QQVFSTTPTL MVSVMILLAN FTVYSIGTNS ALAAVSLSFD TTETNAGLDK GTYSATTQNL LFFNKSHEKF DSSVIKTFSV SSPTDGGSGG
301: NNIRPVQSGT DGDGSDKFRM LSQFSTSDSD VSASGQEEIK QWNLILEESE KMETLDHETM KQMVSPVEAR VEAEESMDYF KTELLYQTGL SQQPHNVLLL
401: ANYAQFLYLI IHDYDRAEKY FKRAAKAEPT DAEALNKYAT FLWKARNDIG RAEETFLEAI SADPTNSFYS ANYAHFLWNT GGDETCFPLD APPQR

Best Arabidopsis Sequence Match ( AT1G07280.2 )
(BLAST)

001: MGVKVATSST FHQWVAHPIV HHSSSLSQTL ASSAVSSPSR RRIIGNDGRS SLSCRSVMQS QRLNPSSPFG TSSTNLRHSK SCELWESTKR PKTQLIRRAF
101: SANVDPFSEE EFAKKMQELT LKFQVSNEEE DNESDTRIDD YTRKMDIVGS HNNFRSDSME PPWPEMVQMS NIERKANSVD LPLSLRIIKR KLQMEEGVLN
201: QVGESACCSV KKAFSSMVFM IRELQSFTLH MRELLLFEDL QGILHRVRKE MQASFVWLFQ QVFSATPTLM VSVMILLANF TVYSIESNSA LAAAVSPPTT
301: LSFSFETTAE ISETQETNQK FDSSMVKTFS VSSPYGKTSF VGGGGGNNIP PPVQSGTDGD GSDQFRKSQF SSSSLGATSA DSDVSVSGQE EIRLWNSILE
401: ETAKMETLDH ETMKGMVSPV EARLEAEESM DYFKTELLYQ TGLSQEPGNV LLLANYAQFL YLIIHDYDRA EKYFKRAAKA EPADAEALNK YATFLWRARN
501: DIWRAEETYL EAISADPTNS VYSANYAHFL WNTGGDETCF PLDAPSQQNN TT

Arabidopsis Description

At1g07280/F22G5_32 [Source:UniProtKB/TrEMBL;Acc:Q8VZC8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.