Factsheet for Bra015570.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06694	Canola	plastid	99.42	99.42
CDY10264	Canola	plastid	96.5	95.94
AT1G07280.1	Thale cress	plastid	83.27	77.54
Bra031567.1-P	Field mustard	plastid	74.12	76.97
Bra018368.1-P	Field mustard	plastid	58.17	64.03
Bra039995.1-P	Field mustard	plastid	59.14	62.55
VIT_06s0004g06290.t01	Wine grape	plastid	55.84	54.25
KRG98335	Soybean	plastid	54.28	52.44
KRH46437	Soybean	plastid	52.53	51.43
Solyc06g076850.2.1	Tomato	plastid	53.89	50.27
PGSC0003DMT400078227	Potato	plastid	53.89	50.09
Bra018168.1-P	Field mustard	plastid	42.8	48.03
Bra019495.1-P	Field mustard	plastid	41.44	46.0
GSMUA_Achr8P02280_001	Banana	plastid	43.77	45.0
GSMUA_Achr9P03650_001	Banana	plastid	43.58	44.18
Os01t0855200-01	Rice	plastid	43.39	43.55
TraesCS3D01G361500.1	Wheat	plastid	40.66	43.54
TraesCS3B01G400100.1	Wheat	plastid	40.47	43.42
TraesCS3A01G368600.1	Wheat	plastid	40.47	43.24
HORVU3Hr1G084970.2	Barley	plastid	39.88	42.44
GSMUA_Achr11P...	Banana	plastid	40.86	42.08
GSMUA_Achr6P33690_001	Banana	plastid	43.58	41.95
Os05t0447700-01	Rice	plastid	39.49	41.94
Zm00001d012325_P001	Maize	plastid	42.02	41.86
Zm00001d042812_P001	Maize	plastid	42.41	41.68
TraesCS1B01G287500.1	Wheat	plastid	38.72	41.54
EES01775	Sorghum	plastid	42.61	41.32
TraesCS1D01G277900.1	Wheat	plastid	37.94	41.14
TraesCS1A01G278600.1	Wheat	plastid	37.35	40.85
KXG22120	Sorghum	plastid	40.08	40.39
Zm00001d038274_P002	Maize	plastid	38.72	39.64
Zm00001d010075_P001	Maize	plastid	39.88	39.05
HORVU1Hr1G073460.2	Barley	plastid	38.33	38.48
GSMUA_Achr5P28840_001	Banana	cytosol	40.47	37.08
Bra020090.1-P	Field mustard	cytosol	10.51	27.84
Bra013269.1-P	Field mustard	mitochondrion	11.09	24.89
Bra021028.1-P	Field mustard	plastid	12.06	23.57
Bra011339.1-P	Field mustard	plastid	10.7	22.54
Bra006547.1-P	Field mustard	plastid	11.48	21.61
Bra002280.1-P	Field mustard	plastid	11.67	21.13
Bra035194.1-P	Field mustard	nucleus	11.67	19.61
Bra008495.1-P	Field mustard	mitochondrion, nucleus	10.89	18.54
Bra015324.1-P	Field mustard	nucleus	9.92	15.99

Protein Annotations

EnsemblPlants:Bra015570.1	EnsemblPlants:Bra015570.1-P	EnsemblPlantsGene:Bra015570	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR011990	InterPro:IPR013026	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR26312
PANTHER:PTHR26312:SF83	PFscan:PS50293	SEG:seg	SUPFAM:SSF48452	UniParc:UPI0002544D88	UniProt:M4DGE6
MapMan:35.2	:	:	:	:	:

Description

AT1G07280 (E=2e-163) | binding

Coordinates

chrA10:-:959929..962487

Molecular Weight (calculated)

57017.2 Da

IEP (calculated)

5.687

GRAVY (calculated)

-0.338

Length

514 amino acids

Sequence
(BLAST)

001: MGVKVATTST FHHLVSQTLV SSAVSSPSKR RSFGHDGRSL SCRSLMQTPP PSSPLFGSLR HSKSSCELLK SSTPTKTQLI RRAFTGSVDP FSEEEFSKKM
101: QELSLKFQSS NEEENSFGLD RSSTSVEPPW PEMVQMSSIE RKANSVDLPI SLRIIKRKLR MEEGVVMTQV GESAVKRAFS SMVFMIRELQ SFTLHMRELL
201: LFEDLQGILL RVRKEMHASF VWLFQQVFSA TPTLMVSVMI LLANFTVYSI GSNSALAAAA TPPTATVSFR FDQTEISTSH EKFDSSAIKT FSVSSPNGKT
301: SFVGGGGNGG NNVPPVQSGT GGDGSDQFRT PSQFSSSSLG AAADSEVSVS GQEESRLWNS IMEESEKMEK LDHETMKQMV APVEARLEAE ESMDYFKTEL
401: LYQTGLSQQP DNVLLLANYA QFLYLIIHDY DRAEKYFKRA AKAEPADAEA LSKYATFLWK ARNDIWRAEE TFLEAISADP TNSFYSANYA HFLWNTGGDE
501: TCFPLDAPPQ QNTT

Best Arabidopsis Sequence Match ( AT1G07280.2 )
(BLAST)

001: MGVKVATSST FHQWVAHPIV HHSSSLSQTL ASSAVSSPSR RRIIGNDGRS SLSCRSVMQS QRLNPSSPFG TSSTNLRHSK SCELWESTKR PKTQLIRRAF
101: SANVDPFSEE EFAKKMQELT LKFQVSNEEE DNESDTRIDD YTRKMDIVGS HNNFRSDSME PPWPEMVQMS NIERKANSVD LPLSLRIIKR KLQMEEGVLN
201: QVGESACCSV KKAFSSMVFM IRELQSFTLH MRELLLFEDL QGILHRVRKE MQASFVWLFQ QVFSATPTLM VSVMILLANF TVYSIESNSA LAAAVSPPTT
301: LSFSFETTAE ISETQETNQK FDSSMVKTFS VSSPYGKTSF VGGGGGNNIP PPVQSGTDGD GSDQFRKSQF SSSSLGATSA DSDVSVSGQE EIRLWNSILE
401: ETAKMETLDH ETMKGMVSPV EARLEAEESM DYFKTELLYQ TGLSQEPGNV LLLANYAQFL YLIIHDYDRA EKYFKRAAKA EPADAEALNK YATFLWRARN
501: DIWRAEETYL EAISADPTNS VYSANYAHFL WNTGGDETCF PLDAPSQQNN TT

Arabidopsis Description

At1g07280/F22G5_32 [Source:UniProtKB/TrEMBL;Acc:Q8VZC8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.