CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042812_P001	Maize	plastid	91.51	92.73
Zm00001d012325_P001	Maize	plastid	89.06	91.47
Os01t0855200-01	Rice	plastid	76.42	79.1
TraesCS3B01G400100.1	Wheat	plastid	67.17	74.32
TraesCS3A01G368600.1	Wheat	plastid	67.36	74.22
TraesCS3D01G361500.1	Wheat	plastid	67.17	74.17
HORVU3Hr1G084970.2	Barley	plastid	65.47	71.84
KXG22120	Sorghum	plastid	59.62	61.96
GSMUA_Achr9P03650_001	Banana	plastid	48.3	50.49
GSMUA_Achr8P02280_001	Banana	plastid	46.23	49.0
CDY02002	Canola	cytosol, mitochondrion, nucleus	13.96	48.68
GSMUA_Achr11P...	Banana	plastid	43.77	46.49
GSMUA_Achr6P33690_001	Banana	plastid	46.6	46.25
VIT_06s0004g06290.t01	Wine grape	plastid	45.09	45.18
Bra018368.1-P	Field mustard	plastid	38.68	43.9
CDY51354	Canola	plastid	39.81	43.78
KRG98335	Soybean	plastid	43.58	43.42
Bra039995.1-P	Field mustard	plastid	39.81	43.42
Solyc06g076850.2.1	Tomato	plastid	44.53	42.83
PGSC0003DMT400078227	Potato	plastid	44.53	42.68
Bra015570.1-P	Field mustard	plastid	41.32	42.61
CDX97868	Canola	plastid	40.19	42.43
CDY06694	Canola	plastid	41.13	42.41
KRH46437	Soybean	plastid	41.7	42.1
CDY10264	Canola	plastid	40.94	41.97
CDY06247	Canola	plastid	39.06	41.82
Bra031567.1-P	Field mustard	plastid	39.06	41.82
AT2G29670.2	Thale cress	plastid	42.08	41.6
CDY09927	Canola	plastid	37.74	40.4
AT1G07280.1	Thale cress	plastid	41.7	40.04
GSMUA_Achr5P28840_001	Banana	cytosol	41.32	39.04
Bra019495.1-P	Field mustard	plastid	30.94	35.42
CDX99068	Canola	plastid	30.19	34.93
Bra018168.1-P	Field mustard	plastid	30.19	34.93
CDX86126	Canola	plastid	31.7	34.57
CDY58299	Canola	plastid	31.51	34.43
CDY38075	Canola	plastid	27.17	33.96
AT3G47080.1	Thale cress	plastid	32.26	33.2
EER93981	Sorghum	plastid	16.79	24.05
EER88623	Sorghum	mitochondrion	13.96	23.12
EER92881	Sorghum	plastid	14.34	22.42
EER91874	Sorghum	plastid	9.81	20.16
EES12482	Sorghum	nucleus	10.94	17.58

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.2	EntrezGene:8058931	UniProt:C5XQF7	ncoils:Coil	EnsemblPlants:EES01775
ProteinID:EES01775	ProteinID:EES01775.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR011990
InterPro:IPR013026	PFAM:PF14559	PFscan:PS50293	PANTHER:PTHR26312	PANTHER:PTHR26312:SF83	EnsemblPlantsGene:SORBI_3003G360800
SUPFAM:SSF48452	unigene:Sbi.3668	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	UniParc:UPI0001A84684	RefSeq:XP_002456655.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:67848596..67851968

Molecular Weight (calculated)

56510.8 Da

IEP (calculated)

4.901

GRAVY (calculated)

-0.299

Length

530 amino acids

Sequence
(BLAST)

001: MGIQVAAVVT PPPCSSPSSS PSSTSPASPS SSAIATSPRH AVLGVRLARS QSSLAGCNAG LIGRRRGGQH AIRRALSASI DSVGSDGGDD EEFLRRIQEL
101: AAGQHPGGAG GWPASVERSA SSVGLPLSLR MLKRRKQQQQ QLEQGRWDER LIDCAGESAR AAVGRAFSSM VLIIRELQSF TLQMRESLLY EDLQGVLARV
201: HAEMHASFVW LFQHIFAGTP ALMVSLMLLL ANFTVYSMGD SVAAAATFRP PSSVVEMVDT TQQPEQSHSH SQQQRFDTPA LKTFSTGRTA SVGGNGDGGG
301: KVRPVAGATG DGQSDESSYR QSGAVVPQDV SQSQATPLGA GAGSGSEASV SESDSMAVEE AAQQQTVQDE LVIWKRISDE ATRMQASVRA EELMDPEILE
401: QLVAPVEAPK PDVAYSSEHV ATAQRYEQAV SEEPNSSLLL ANFAQFLYQV QGDLDRAEHF FKRAVRAEPA DAEALGRYAA FLWQARNDLA AAEETYQEAI
501: AADPGNAHHA AAYAHFLWNT GGEDTCYPLD

Best Arabidopsis Sequence Match ( AT1G07280.2 )
(BLAST)

001: MGVKVATSST FHQWVAHPIV HHSSSLSQTL ASSAVSSPSR RRIIGNDGRS SLSCRSVMQS QRLNPSSPFG TSSTNLRHSK SCELWESTKR PKTQLIRRAF
101: SANVDPFSEE EFAKKMQELT LKFQVSNEEE DNESDTRIDD YTRKMDIVGS HNNFRSDSME PPWPEMVQMS NIERKANSVD LPLSLRIIKR KLQMEEGVLN
201: QVGESACCSV KKAFSSMVFM IRELQSFTLH MRELLLFEDL QGILHRVRKE MQASFVWLFQ QVFSATPTLM VSVMILLANF TVYSIESNSA LAAAVSPPTT
301: LSFSFETTAE ISETQETNQK FDSSMVKTFS VSSPYGKTSF VGGGGGNNIP PPVQSGTDGD GSDQFRKSQF SSSSLGATSA DSDVSVSGQE EIRLWNSILE
401: ETAKMETLDH ETMKGMVSPV EARLEAEESM DYFKTELLYQ TGLSQEPGNV LLLANYAQFL YLIIHDYDRA EKYFKRAAKA EPADAEALNK YATFLWRARN
501: DIWRAEETYL EAISADPTNS VYSANYAHFL WNTGGDETCF PLDAPSQQNN TT

Arabidopsis Description

At1g07280/F22G5_32 [Source:UniProtKB/TrEMBL;Acc:Q8VZC8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.