CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038274_P002	Maize	plastid	90.2	91.63
Os05t0447700-01	Rice	plastid	76.47	80.58
TraesCS1D01G277900.1	Wheat	plastid	68.24	73.42
TraesCS1B01G287500.1	Wheat	plastid	68.24	72.65
TraesCS1A01G278600.1	Wheat	plastid	66.08	71.7
HORVU1Hr1G073460.2	Barley	plastid	68.43	68.16
EES01775	Sorghum	plastid	61.96	59.62
GSMUA_Achr8P02280_001	Banana	plastid	45.49	46.4
GSMUA_Achr9P03650_001	Banana	plastid	45.69	45.96
CDY02002	Canola	cytosol, mitochondrion, nucleus	13.53	45.39
GSMUA_Achr11P...	Banana	plastid	42.94	43.89
GSMUA_Achr6P33690_001	Banana	plastid	44.71	42.7
VIT_06s0004g06290.t01	Wine grape	plastid	43.33	41.78
KRG98335	Soybean	plastid	42.55	40.79
Bra018368.1-P	Field mustard	plastid	36.86	40.26
Bra015570.1-P	Field mustard	plastid	40.39	40.08
CDY51354	Canola	plastid	37.84	40.04
KRH46437	Soybean	plastid	41.18	40.0
CDY06694	Canola	plastid	40.2	39.88
Bra039995.1-P	Field mustard	plastid	37.84	39.71
CDY10264	Canola	plastid	40.2	39.65
CDX97868	Canola	plastid	39.02	39.64
AT2G29670.2	Thale cress	plastid	41.57	39.55
Bra031567.1-P	Field mustard	plastid	37.45	38.59
CDY06247	Canola	plastid	37.45	38.59
Solyc06g076850.2.1	Tomato	plastid	41.37	38.29
PGSC0003DMT400078227	Potato	plastid	41.18	37.97
AT1G07280.1	Thale cress	plastid	40.78	37.68
CDY09927	Canola	plastid	36.47	37.58
GSMUA_Achr5P28840_001	Banana	cytosol	39.41	35.83
Bra018168.1-P	Field mustard	plastid	30.98	34.5
CDX99068	Canola	plastid	30.78	34.28
CDX86126	Canola	plastid	31.96	33.54
Bra019495.1-P	Field mustard	plastid	29.41	32.4
AT3G47080.1	Thale cress	plastid	32.55	32.23
CDY38075	Canola	plastid	26.67	32.08
CDY58299	Canola	plastid	30.0	31.55
EER93981	Sorghum	plastid	17.45	24.05
EER88623	Sorghum	mitochondrion	14.51	23.12
EER92881	Sorghum	plastid	13.33	20.06
EER91874	Sorghum	plastid	9.8	19.38
EES12482	Sorghum	nucleus	10.98	16.97

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.2	EntrezGene:8061745	UniProt:A0A1B6P8Q4	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR011990	InterPro:IPR013026	EnsemblPlants:KXG22120	ProteinID:KXG22120	ProteinID:KXG22120.1
PFAM:PF13432	PFscan:PS50293	PANTHER:PTHR26312	PANTHER:PTHR26312:SF83	EnsemblPlantsGene:SORBI_3009G156900	SUPFAM:SSF48452
InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	UniParc:UPI00081ADC05	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr9:-:51446831..51449521

Molecular Weight (calculated)

53521.0 Da

IEP (calculated)

6.143

GRAVY (calculated)

-0.157

Length

510 amino acids

Sequence
(BLAST)

001: MGFQVAAVAP SPCARSSSAS SSPSTSSRPL PAFLGGGGGG GGCAGLARSR SPLNWGTGVM VRRPRLARTP ARCALSASLD GMGGGDAEFM KRIEELAAAV
101: GVQPAGAAGC GGWPASVERS ASNVGLPLSL RMLKRKKQQQ QQVVAARHSR WDEELLGMGS AGESVGRAFS SMVLIVRELQ SFALQQMRDA LLCDDLQGVL
201: ARVQGEMHAS FVWLFQHIFA GTPALMVSLM LLLANFTVQS MGHSVAAAAA TIPPTPPAVA LVNTQRAEPS RPPRFDAAAS VKTFSVGRTA SVGGNSGGGG
301: KAPPVAGATG DGRSDESLYR LSRVAPQQPS SAPPGAEVAA QDAANADEQA IWEMMLAEAS KMQASARAEE LSDSDVLRSL VAPVEAELET EDHAEHTLTQ
401: QRYEQAVAAE PNNSLILANF AQFLYLVQND HDRAEHYFER AVRAEPADSE ALSWYATFLW KARNDLAGAE DTYQEAIAAD PGNAHHAAAY AHFLWNTGAC
501: TGAAATRRDA

Best Arabidopsis Sequence Match ( AT2G29670.2 )
(BLAST)

001: MGVKVASSST FLQWTTQPII HQSSSPSQTL ASGTITSPSK RRSTVHDGRF LSCRFVTQRL NRSALFGTPS TKLHRPKSCE LWKSSSSSSR PIKTQSFRRV
101: YSANLDPFSD EEFSKKIQEL TLRFNIPHHD DDENSIEPPW NEMVHLSSIE MKANSVDLPL SLRIIKKKRQ WEEGVKQAGE SACCSMNKAF SSMVFMIREL
201: QSFTLHMREI LFYEDLQEIL LRVREEMQQS FVWLFQQVFS ATPTLMVYVM ILLANFTVYS IGNNSSALAA VAPLPPTITE LTTVSETEET NVKFDSSVVK
301: TFFVSSPSGS IASVGGNNNG GGGNVKPVLS GTDGDGSDGS EQFRTIIPEG VSQLSSSNFG SEPSVSGQDE HRLWNSMVEE AERMQYSNID DSLDQETRKR
401: FVSHVEARVE AEEDTGYFKT ELMYQTELSQ EPNNPLLLAN YAQFLYLVSN DHDRAEEYFK RAVGVEPKDA EAFSKYATFL WRARDDLWAA EETFLEAIDA
501: DPTNSYYAAN YANFLWNTGG DDTCFPLDDE SHEDTI

Arabidopsis Description

At2g29670/T27A16.23 [Source:UniProtKB/TrEMBL;Acc:O82388]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.