CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG98335	Soybean	plastid	90.67	89.47
CDY02002	Canola	cytosol, mitochondrion, nucleus	18.48	63.82
VIT_06s0004g06290.t01	Wine grape	plastid	62.86	62.38
Solyc06g076850.2.1	Tomato	plastid	58.86	56.08
PGSC0003DMT400078227	Potato	plastid	59.05	56.06
CDY51354	Canola	plastid	50.86	55.39
Bra039995.1-P	Field mustard	plastid	51.24	55.35
Bra018368.1-P	Field mustard	plastid	49.14	55.25
CDX97868	Canola	plastid	52.19	54.58
AT2G29670.2	Thale cress	plastid	54.48	53.36
CDY06694	Canola	plastid	51.81	52.92
CDY10264	Canola	plastid	51.81	52.61
Bra015570.1-P	Field mustard	plastid	51.43	52.53
Bra031567.1-P	Field mustard	plastid	49.33	52.32
CDY06247	Canola	plastid	49.33	52.32
CDY09927	Canola	plastid	48.57	51.52
AT1G07280.1	Thale cress	plastid	53.9	51.27
CDX99068	Canola	plastid	43.43	49.78
Bra018168.1-P	Field mustard	plastid	43.43	49.78
GSMUA_Achr8P02280_001	Banana	plastid	46.48	48.8
CDX86126	Canola	plastid	44.57	48.15
AT3G47080.1	Thale cress	plastid	46.48	47.38
GSMUA_Achr9P03650_001	Banana	plastid	45.71	47.34
Bra019495.1-P	Field mustard	plastid	41.52	47.08
Os05t0447700-01	Rice	plastid	42.29	45.87
CDY38075	Canola	plastid	36.76	45.52
GSMUA_Achr11P...	Banana	plastid	43.24	45.49
CDY58299	Canola	plastid	41.9	45.36
GSMUA_Achr6P33690_001	Banana	plastid	45.33	44.57
TraesCS1D01G277900.1	Wheat	plastid	40.0	44.3
TraesCS1B01G287500.1	Wheat	plastid	40.19	44.05
TraesCS3D01G361500.1	Wheat	plastid	40.19	43.96
Os01t0855200-01	Rice	plastid	42.86	43.95
TraesCS3B01G400100.1	Wheat	plastid	40.0	43.84
HORVU3Hr1G084970.2	Barley	plastid	40.0	43.48
TraesCS3A01G368600.1	Wheat	plastid	39.81	43.45
TraesCS1A01G278600.1	Wheat	plastid	38.67	43.19
Zm00001d012325_P001	Maize	plastid	41.71	42.44
Zm00001d042812_P001	Maize	plastid	41.9	42.06
EES01775	Sorghum	plastid	42.1	41.7
KXG22120	Sorghum	plastid	40.0	41.18
Zm00001d038274_P002	Maize	plastid	38.48	40.24
HORVU1Hr1G073460.2	Barley	plastid	39.24	40.23
KRH73162	Soybean	mitochondrion	36.76	40.04
Zm00001d010075_P001	Maize	plastid	39.81	39.81
KRH14978	Soybean	cytosol, plastid	35.05	38.57
GSMUA_Achr5P28840_001	Banana	cytosol	40.57	37.97
KRH03683	Soybean	plastid	13.71	27.59
KRH20249	Soybean	plastid	13.14	26.85
KRG95736	Soybean	cytosol, nucleus, plastid	9.9	24.41
KRH44461	Soybean	plastid	13.9	23.17
KRH09728	Soybean	cytosol	4.95	23.01
KRH23575	Soybean	plastid	11.24	22.96
KRH39558	Soybean	plastid	11.05	22.92
KRH47446	Soybean	plastid	13.14	21.9
KRH74400	Soybean	nucleus, plastid	11.24	20.27
KRH67454	Soybean	nucleus	12.76	18.77
KRH34549	Soybean	nucleus	9.71	13.04
KRG92250	Soybean	cytosol	9.52	12.92

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:100791735	MapMan:35.2	EMBL:ACUP02005344	EnsemblPlantsGene:GLYMA_08G333700	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0006139	GO:GO:0006396	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	InterPro:HAT	UniProt:I1KYU9	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734
EnsemblPlants:KRH46437	ProteinID:KRH46437	ProteinID:KRH46437.1	PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR26312
PANTHER:PTHR26312:SF83	SMART:SM00386	SUPFAM:SSF48452	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat
UniParc:UPI0001BA8B22	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:45093514..45097797

Molecular Weight (calculated)

59144.2 Da

IEP (calculated)

4.937

GRAVY (calculated)

-0.413

Length

525 amino acids

Sequence
(BLAST)

001: MELKFMQFSQ HVLPHSPSSS QTLASALSSP SSSKTRTLVC RFVNRSSLFP TTTRLLRRTK SFEHHALFTR RGSLRRACSA SLEPFSDEEF AKKIEDLALK
101: FQLSDENTNA NDLDSEDFQE ISLSSLNFAE EFEPPEEIFP ANIERKANSV ELPFSLRIIK KKLQWKEGFR EAGESAYCSV KKAFSSMVFI IRELHSFTMQ
201: MREFLFYEDL QGILERVQNE MHASFVWLFQ QVFSHTPTLM VYVMILLANF TVHSMGNNAA IAAVAPPPVT SVVEAHDQRG HIQSHNIDSS SIKTFSVSNG
301: KNTAYVGGGN GGGGKVRPAG NGTDGDGRFD RSRHGTVFSD GGASSQVYKT GDKTESVSGQ EEEEELNLWN AMVEEASRME GLDRDVMKRF VSPVMARIES
401: DDYAEYLRTE LVYQTGLSQD PSNTLLLVNY AQFLYLVVHD FDRAEELFKR AIEVEPPDAE AYNKYAKFLW KVKNDLWAAE ETYLEAISAD PDNAFYAADY
501: AHFLWNTGGE DTCFPLSSPD NSKEV

Best Arabidopsis Sequence Match ( AT1G07280.2 )
(BLAST)

001: MGVKVATSST FHQWVAHPIV HHSSSLSQTL ASSAVSSPSR RRIIGNDGRS SLSCRSVMQS QRLNPSSPFG TSSTNLRHSK SCELWESTKR PKTQLIRRAF
101: SANVDPFSEE EFAKKMQELT LKFQVSNEEE DNESDTRIDD YTRKMDIVGS HNNFRSDSME PPWPEMVQMS NIERKANSVD LPLSLRIIKR KLQMEEGVLN
201: QVGESACCSV KKAFSSMVFM IRELQSFTLH MRELLLFEDL QGILHRVRKE MQASFVWLFQ QVFSATPTLM VSVMILLANF TVYSIESNSA LAAAVSPPTT
301: LSFSFETTAE ISETQETNQK FDSSMVKTFS VSSPYGKTSF VGGGGGNNIP PPVQSGTDGD GSDQFRKSQF SSSSLGATSA DSDVSVSGQE EIRLWNSILE
401: ETAKMETLDH ETMKGMVSPV EARLEAEESM DYFKTELLYQ TGLSQEPGNV LLLANYAQFL YLIIHDYDRA EKYFKRAAKA EPADAEALNK YATFLWRARN
501: DIWRAEETYL EAISADPTNS VYSANYAHFL WNTGGDETCF PLDAPSQQNN TT

Arabidopsis Description

At1g07280/F22G5_32 [Source:UniProtKB/TrEMBL;Acc:Q8VZC8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.