CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH14978	Soybean	cytosol, plastid	90.66	91.61
VIT_13s0067g00240.t01	Wine grape	cytosol	36.51	44.11
Os08t0382600-00	Rice	mitochondrion	13.49	37.14
PGSC0003DMT400069757	Potato	plastid	34.23	36.91
KRG98335	Soybean	plastid	40.66	36.84
KRH46437	Soybean	plastid	40.04	36.76
Solyc05g052700.2.1	Tomato	extracellular	33.82	36.14
KRH09728	Soybean	cytosol	5.6	23.89
HORVU1Hr1G073400.1	Barley	endoplasmic reticulum	15.15	22.81
KRH03683	Soybean	plastid	11.62	21.46
KRH20249	Soybean	plastid	11.2	21.01
KRG95736	Soybean	cytosol, nucleus, plastid	9.13	20.66
KRH39558	Soybean	plastid	10.58	20.16
KRH23575	Soybean	plastid	10.58	19.84
KRH44461	Soybean	plastid	12.45	19.05
KRH47446	Soybean	plastid	12.03	18.41
KRH67454	Soybean	nucleus	12.66	17.09
KRH74400	Soybean	nucleus, plastid	10.17	16.84
KRH34549	Soybean	nucleus	9.75	12.02
KRG92250	Soybean	cytosol	9.34	11.63

Protein Annotations

EMBL:ACUP02001268	EnsemblPlants:KRH73162	EnsemblPlantsGene:GLYMA_02G255200	EntrezGene:100775399	Gene3D:1.25.40.10	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:IPR011990
InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR26312	PANTHER:PTHR26312:SF87	ProteinID:KRH73162	ProteinID:KRH73162.1	SEG:seg
SUPFAM:SSF48452	TMHMM:TMhelix	UniParc:UPI0002337A3F	UniProt:K7KAR0	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr2:-:44225495..44228320

Molecular Weight (calculated)

55599.1 Da

IEP (calculated)

4.674

GRAVY (calculated)

-0.408

Length

482 amino acids

Sequence
(BLAST)

001: MASRVSPSLK CWQFRTPYYC DSWKTPRAVP SSILRHVTER NNVMPPCGLL VHRSRKNLRV QRGKRVYSSL FDDFRQEERM NLVQDGCWDE NGNEIACAVS
101: DNEFENDSSA KGCSSEEFGT MKPEVLEPSL LGIQPEPPSW PERDEILRLT FERKVNSVGI PLSIRMIKKK LQLEEGLKEA GELNELTNCS VNKTFSSMMF
201: IMHELQSRAL QTRESLFGED LQSVMTKLER EMDASFVWLF QQVFWKTPAL MVFVMVLLAN FLVFSMNDNT VKAITPSSMI TKALTLTGNE SKVRHSQVDT
301: DVDQGEYVNK ELNEEEEMLW NSFLEEASML QKELSGEVLD HETRQRLVAP VSVELEGDQY EEYVKTELYY KKHLLRTPHC SLLLSNYAQF LFLVLHDIDG
401: AEEYYKRSVL AESPEAEAFS RYADFLLMVR KDVWAAELRY LQALEADPGN TYYLSKYASF LWNTGGQDAN SFPIEELDNL QL

Best Arabidopsis Sequence Match ( AT1G07280.2 )
(BLAST)

001: MGVKVATSST FHQWVAHPIV HHSSSLSQTL ASSAVSSPSR RRIIGNDGRS SLSCRSVMQS QRLNPSSPFG TSSTNLRHSK SCELWESTKR PKTQLIRRAF
101: SANVDPFSEE EFAKKMQELT LKFQVSNEEE DNESDTRIDD YTRKMDIVGS HNNFRSDSME PPWPEMVQMS NIERKANSVD LPLSLRIIKR KLQMEEGVLN
201: QVGESACCSV KKAFSSMVFM IRELQSFTLH MRELLLFEDL QGILHRVRKE MQASFVWLFQ QVFSATPTLM VSVMILLANF TVYSIESNSA LAAAVSPPTT
301: LSFSFETTAE ISETQETNQK FDSSMVKTFS VSSPYGKTSF VGGGGGNNIP PPVQSGTDGD GSDQFRKSQF SSSSLGATSA DSDVSVSGQE EIRLWNSILE
401: ETAKMETLDH ETMKGMVSPV EARLEAEESM DYFKTELLYQ TGLSQEPGNV LLLANYAQFL YLIIHDYDRA EKYFKRAAKA EPADAEALNK YATFLWRARN
501: DIWRAEETYL EAISADPTNS VYSANYAHFL WNTGGDETCF PLDAPSQQNN TT

Arabidopsis Description

At1g07280/F22G5_32 [Source:UniProtKB/TrEMBL;Acc:Q8VZC8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.