Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
- mitochondrion 1
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_07s0005g04340.t01 | Wine grape | cytosol, mitochondrion, nucleus | 38.5 | 67.77 |
| KRH67454 | Soybean | nucleus | 92.96 | 55.46 |
| HORVU5Hr1G031990.1 | Barley | nucleus | 23.47 | 42.37 |
| GSMUA_Achr1P01000_001 | Banana | plastid | 46.95 | 36.9 |
| KRH09728 | Soybean | cytosol | 16.9 | 31.86 |
| GSMUA_Achr5P15660_001 | Banana | plastid | 40.85 | 30.0 |
| PGSC0003DMT400022129 | Potato | plastid | 50.23 | 29.72 |
| Solyc09g064630.2.1 | Tomato | plastid | 49.3 | 29.41 |
| TraesCS2A01G367000.1 | Wheat | plastid | 36.62 | 28.89 |
| TraesCS2D01G363900.1 | Wheat | mitochondrion, plastid | 36.62 | 28.89 |
| TraesCS5A01G512000.1 | Wheat | mitochondrion, plastid | 41.31 | 28.03 |
| EER92881 | Sorghum | plastid | 44.6 | 28.02 |
| TraesCS4B01G342900.1 | Wheat | mitochondrion | 41.31 | 27.94 |
| Os04t0510600-01 | Rice | plastid | 36.15 | 27.8 |
| Zm00001d003035_P001 | Maize | plastid | 35.68 | 27.34 |
| KRH03683 | Soybean | plastid | 32.86 | 26.82 |
| Zm00001d027613_P002 | Maize | plastid | 43.66 | 26.12 |
| KRH20249 | Soybean | plastid | 31.46 | 26.07 |
| CDY18241 | Canola | nucleus | 35.21 | 25.86 |
| HORVU4Hr1G084230.1 | Barley | mitochondrion, plastid | 40.85 | 25.51 |
| HORVU2Hr1G088520.1 | Barley | cytosol, nucleus, plastid | 35.68 | 25.5 |
| Os03t0140700-01 | Rice | plastid | 40.38 | 25.37 |
| CDX89816 | Canola | nucleus | 33.8 | 24.74 |
| EES12482 | Sorghum | nucleus | 37.56 | 24.24 |
| KRH39558 | Soybean | plastid | 27.7 | 23.32 |
| AT1G04530.1 | Thale cress | cytoskeleton, cytosol, nucleus | 32.86 | 22.58 |
| Bra015324.1-P | Field mustard | nucleus | 33.8 | 22.57 |
| KRH23575 | Soybean | plastid | 27.23 | 22.57 |
| KRH44461 | Soybean | plastid | 31.92 | 21.59 |
| KRH74400 | Soybean | nucleus, plastid | 28.64 | 20.96 |
| KRG92250 | Soybean | cytosol | 37.09 | 20.41 |
| CDY59180 | Canola | cytosol | 16.9 | 20.34 |
| KRH47446 | Soybean | plastid | 29.58 | 20.0 |
| KRH34549 | Soybean | nucleus | 35.68 | 19.44 |
| KRH46437 | Soybean | plastid | 24.41 | 9.9 |
| KRG98335 | Soybean | plastid | 24.41 | 9.77 |
| KRH73162 | Soybean | mitochondrion | 20.66 | 9.13 |
| KRH14978 | Soybean | cytosol, plastid | 18.78 | 8.39 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:35.2 | UniProt:A0A0R0EYT8 | EMBL:ACUP02012131 | EnsemblPlantsGene:GLYMA_19G168300 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 | GO:GO:0006396 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | InterPro:HAT | InterPro:IPR011990 | InterPro:IPR013026 | EnsemblPlants:KRG95736 | ProteinID:KRG95736 |
| ProteinID:KRG95736.1 | PFscan:PS50293 | PANTHER:PTHR26312 | PANTHER:PTHR26312:SF89 | SMART:SM00386 | SUPFAM:SSF48452 |
| InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | UniParc:UPI0006ED5961 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr19:-:42915379..42918029
Molecular Weight (calculated)
23151.3 Da
IEP (calculated)
4.134
GRAVY (calculated)
-0.697
Length
213 amino acids
Sequence
(BLAST)
(BLAST)
001: MESESEDGFS VVNGGKDVIF SEEVRVKNGV CRVSFGDQEE VGSGKEMYLA KGLGVECCGD GIGGCRGGGG GDHNPLGSGG NDGDRHAVEE YYKKMVKENP
101: GDPLFLRNYA NFLYQYKQDC EGAEEYYSRA ILADPDDGEV LSQYGKLVWE LHHDQERASS YFERAVQASP EDSHVQAAYA SFLWDTEEDE DGSNEPQCLP
201: PHSLQGAIAT AGA
101: GDPLFLRNYA NFLYQYKQDC EGAEEYYSRA ILADPDDGEV LSQYGKLVWE LHHDQERASS YFERAVQASP EDSHVQAAYA SFLWDTEEDE DGSNEPQCLP
201: PHSLQGAIAT AGA
001: MKSLLMRTGS MPVLQNRLIS GGSSRKMTPI SRTNSVESLS SYGERFAGGK ISIEVKANVG MRRVLSESDV IRSERMLKRV GSKPSPARIP EDDEAGEEEI
101: RFADGWGSMI SGGLPVEEKC FTGGGVGGGS GYSGGYGNGG GGGYEDKSKI GDYYREMLRS NPNNSLLLMN YGKFLYEVEK DAEGAEEYYG RAILENPGDG
201: EALSMYGRLI WETKRDEKRA QGYFDQAVNA SPNDCMVLGS YARFMWEAED DDDDDEEEEE EEWMAASPLM VSAV
101: RFADGWGSMI SGGLPVEEKC FTGGGVGGGS GYSGGYGNGG GGGYEDKSKI GDYYREMLRS NPNNSLLLMN YGKFLYEVEK DAEGAEEYYG RAILENPGDG
201: EALSMYGRLI WETKRDEKRA QGYFDQAVNA SPNDCMVLGS YARFMWEAED DDDDDEEEEE EEWMAASPLM VSAV
Arabidopsis Description
Tetratricopeptide repeat (TPR)-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WUZ1]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.