Factsheet for HORVU5Hr1G031990.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_07s0005g04340.t01	Wine grape	cytosol, mitochondrion, nucleus	42.37	41.32
TraesCS5A01G512000.1	Wheat	mitochondrion, plastid	77.97	29.3
TraesCS4B01G342900.1	Wheat	mitochondrion	77.97	29.21
HORVU4Hr1G084230.1	Barley	mitochondrion, plastid	78.81	27.27
KRG95736	Soybean	cytosol, nucleus, plastid	42.37	23.47
EER92881	Sorghum	plastid	65.25	22.71
Os03t0140700-01	Rice	plastid	63.56	22.12
Zm00001d027613_P002	Maize	plastid	63.56	21.07
GSMUA_Achr1P01000_001	Banana	plastid	46.61	20.3
HORVU2Hr1G088520.1	Barley	cytosol, nucleus, plastid	38.98	15.44
KRH67454	Soybean	nucleus	44.92	14.85
GSMUA_Achr5P15660_001	Banana	plastid	36.44	14.83
HORVU7Hr1G090280.1	Barley	mitochondrion	32.2	13.19
Solyc09g064630.2.1	Tomato	plastid	39.83	13.17
PGSC0003DMT400022129	Potato	plastid	39.83	13.06
CDY18241	Canola	nucleus	28.81	11.72
CDX89816	Canola	nucleus	28.81	11.68
KRH34549	Soybean	nucleus	38.14	11.51
AT1G04530.1	Thale cress	cytoskeleton, cytosol, nucleus	28.81	10.97
PGSC0003DMT400003940	Potato	nucleus	37.29	10.95
KRG92250	Soybean	cytosol	35.59	10.85
Solyc09g090930.2.1	Tomato	nucleus	36.44	10.8
Bra015324.1-P	Field mustard	nucleus	28.81	10.66
VIT_05s0049g01950.t01	Wine grape	plastid	42.37	9.42
HORVU1Hr1G050780.2	Barley	plastid	27.12	8.4
Solyc03g005710.1.1	Tomato	cytosol	26.27	8.2
CDY59180	Canola	cytosol	11.86	7.91
HORVU3Hr1G084970.2	Barley	plastid	26.27	6.42
PGSC0003DMT400035002	Potato	plastid	38.14	6.36
HORVU1Hr1G073460.2	Barley	plastid	27.12	6.25
HORVU1Hr1G045530.3	Barley	cytosol	11.02	4.59
HORVU1Hr1G073400.1	Barley	endoplasmic reticulum	1.69	0.62

Protein Annotations

EnsemblPlants:HORVU5Hr1G031990.1	EnsemblPlantsGene:HORVU5Hr1G031990	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR011990	InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR26312	PANTHER:PTHR26312:SF89	UniParc:UPI000B473877	UniProt:A0A287QTF4
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:-:205906042..205906994

Molecular Weight (calculated)

12784.4 Da

IEP (calculated)

4.822

GRAVY (calculated)

-0.694

Length

118 amino acids

Sequence
(BLAST)

001: MRIPATASSS GSTHLYQVKG GRRRAGEYYS RAILAGPNDG ELLSEYAKLV WEVHGDEERT SSYFDRAAKA DPHNNQVLAA QATFLWDTDN SVGPQDDDDA
101: TSYTGFPAAH PSMTSATS

Best Arabidopsis Sequence Match ( AT4G17940.1 )
(BLAST)

001: MKSLLMRTGS MPVLQNRLIS GGSSRKMTPI SRTNSVESLS SYGERFAGGK ISIEVKANVG MRRVLSESDV IRSERMLKRV GSKPSPARIP EDDEAGEEEI
101: RFADGWGSMI SGGLPVEEKC FTGGGVGGGS GYSGGYGNGG GGGYEDKSKI GDYYREMLRS NPNNSLLLMN YGKFLYEVEK DAEGAEEYYG RAILENPGDG
201: EALSMYGRLI WETKRDEKRA QGYFDQAVNA SPNDCMVLGS YARFMWEAED DDDDDEEEEE EEWMAASPLM VSAV

Arabidopsis Description

Tetratricopeptide repeat (TPR)-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WUZ1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.