Factsheet for HORVU1Hr1G050780.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G194200.1	Wheat	plastid	53.28	86.02
TraesCS1B01G209200.1	Wheat	plastid	51.44	82.7
Zm00001d030086_P001	Maize	plastid	34.12	52.21
Os10t0576600-01	Rice	plastid	30.97	51.98
EER91874	Sorghum	plastid	34.65	51.16
GSMUA_Achr5P03500_001	Banana	plastid	24.67	37.75
GSMUA_Achr4P27320_001	Banana	plastid	24.15	34.72
Bra013269.1-P	Field mustard	mitochondrion	20.21	33.62
CDX78813	Canola	mitochondrion	19.95	33.19
KRH39558	Soybean	plastid	21.0	31.62
VIT_02s0012g01590.t01	Wine grape	nucleus	17.06	30.23
CDY44501	Canola	mitochondrion	19.16	30.04
KRH74400	Soybean	nucleus, plastid	22.31	29.21
AT4G17940.1	Thale cress	mitochondrion	20.21	28.1
Bra021028.1-P	Field mustard	plastid	19.16	27.76
CDX76550	Canola	plastid	19.16	27.76
Solyc08g076730.2.1	Tomato	plastid	21.78	27.48
CDY08881	Canola	plastid	18.64	27.31
HORVU5Hr1G031990.1	Barley	nucleus	8.4	27.12
PGSC0003DMT400045174	Potato	plastid	21.26	26.82
HORVU7Hr1G090280.1	Barley	mitochondrion	19.16	25.35
HORVU2Hr1G088520.1	Barley	cytosol, nucleus, plastid	15.75	20.13
HORVU4Hr1G084230.1	Barley	mitochondrion, plastid	17.85	19.94
HORVU3Hr1G084970.2	Barley	plastid	15.49	12.22
HORVU1Hr1G073460.2	Barley	plastid	13.12	9.77
HORVU1Hr1G045530.3	Barley	cytosol	5.77	7.77
HORVU1Hr1G073400.1	Barley	endoplasmic reticulum	2.89	3.44

Protein Annotations

EnsemblPlants:HORVU1Hr1G050780.2	EnsemblPlantsGene:HORVU1Hr1G050780	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR011990	InterPro:IPR013026	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR26312	PANTHER:PTHR26312:SF53
PFscan:PS50293	SEG:seg	SUPFAM:SSF48452	UniParc:UPI000B46218D	UniProt:A0A287FIQ6	MapMan:35.2

Description

No Description!

Coordinates

chrchr1H:-:376489465..376491007

Molecular Weight (calculated)

40546.3 Da

IEP (calculated)

11.091

GRAVY (calculated)

-0.460

Length

381 amino acids

Sequence
(BLAST)

001: RGLPPHSRTH APAHPRAPPS PTRALRPSRA PLFLRALHPV PDAVNLAVAR LPAHSRAPPP SSSSSIKRSH QLATPARHRT MEATSSLTRS LSLVPRPRRS
101: SRAPKSPHMP TLSPAPRVLP LRRARSDADL LGSVVPAAAP GSAGSVLLRS PRPRTRNEED APMEDCFDGA GAGKGNNSSG RGGGGGGAGG NGQSAGMGEH
201: YRRVLRLEPG NPLLLRNYGK YLHEVEHDLA GAEEYYGRAL LACPGDADLL GLYGRVLWEA NQDKDRAAGY FERAVQAAPD DWYERAPTIF ATTVLCDQSN
301: YLLLTSDVYL QLRAGIVREL PVGRRGRGRG RSEHGGGLLS GVGAGLLTLA VDLGWRGGGG LLYNTAPHCT VRRRAGMAAA W

Best Arabidopsis Sequence Match ( AT4G17940.1 )
(BLAST)

001: MKSLLMRTGS MPVLQNRLIS GGSSRKMTPI SRTNSVESLS SYGERFAGGK ISIEVKANVG MRRVLSESDV IRSERMLKRV GSKPSPARIP EDDEAGEEEI
101: RFADGWGSMI SGGLPVEEKC FTGGGVGGGS GYSGGYGNGG GGGYEDKSKI GDYYREMLRS NPNNSLLLMN YGKFLYEVEK DAEGAEEYYG RAILENPGDG
201: EALSMYGRLI WETKRDEKRA QGYFDQAVNA SPNDCMVLGS YARFMWEAED DDDDDEEEEE EEWMAASPLM VSAV

Arabidopsis Description

Tetratricopeptide repeat (TPR)-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WUZ1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.