Factsheet for Os10t0576600-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2
cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G194200.1	Wheat	plastid	59.03	56.78
TraesCS1B01G209200.1	Wheat	plastid	58.15	55.7
Zm00001d030086_P001	Maize	plastid	59.91	54.62
EER91874	Sorghum	plastid	59.03	51.94
GSMUA_Achr5P03500_001	Banana	plastid	46.7	42.57
GSMUA_Achr4P27320_001	Banana	plastid	48.02	41.13
Bra013269.1-P	Field mustard	mitochondrion	37.0	36.68
KRH39558	Soybean	plastid	39.21	35.18
CDX78813	Canola	mitochondrion	35.24	34.93
CDY44501	Canola	mitochondrion	36.56	34.16
VIT_02s0012g01590.t01	Wine grape	nucleus	31.28	33.02
Os06t0606700-00	Rice	plastid	40.09	32.73
AT4G17940.1	Thale cress	mitochondrion	39.21	32.48
KRH74400	Soybean	nucleus, plastid	40.09	31.27
Bra021028.1-P	Field mustard	plastid	36.12	31.18
CDX76550	Canola	plastid	36.12	31.18
HORVU1Hr1G050780.2	Barley	plastid	51.98	30.97
Solyc08g076730.2.1	Tomato	plastid	40.97	30.79
CDY08881	Canola	plastid	35.24	30.77
PGSC0003DMT400045174	Potato	plastid	40.53	30.46
Os04t0510600-01	Rice	plastid	29.52	24.19
Os04t0496700-00	Rice	nucleus	20.26	22.33
Os03t0140700-01	Rice	plastid	30.84	20.65
Os07t0542800-00	Rice	cytosol, mitochondrion, nucleus, plastid	18.94	17.48
Os10t0501900-01	Rice	plastid	18.94	11.85
Os05t0447700-01	Rice	plastid	22.47	10.54
Os01t0855200-01	Rice	plastid	22.91	10.16
Os08t0382600-00	Rice	mitochondrion	3.52	4.57

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.2	EntrezGene:4349493	ProteinID:AAL67600.1	ProteinID:AAP55154.1	EMBL:AK061555
EMBL:AK099195	EMBL:AK104125	EMBL:AK104496	ProteinID:BAF27323.1	ProteinID:BAT12204.1	ProteinID:EAZ17079.1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR011990	InterPro:IPR013026	EnsemblPlantsGene:Os10g0576600
EnsemblPlants:Os10t0576600-01	PFscan:PS50293	PANTHER:PTHR26312	PANTHER:PTHR26312:SF53	UniProt:Q7XBV4	SUPFAM:SSF48452
InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	UniParc:UPI00000A798C	RefSeq:XP_015612713.1	SEG:seg	:

Description

Tetratricopeptide-like helical domain containing protein. (Os10t0576600-01);Hypothetical conserved gene. (Os10t0576600-02)

Coordinates

chr10:-:22964272..22965575

Molecular Weight (calculated)

24807.7 Da

IEP (calculated)

4.381

GRAVY (calculated)

-0.623

Length

227 amino acids

Sequence
(BLAST)

001: MEATGTRLTR SASLSPRLRR SPTALCVSPR SMHHHHQQQQ QSLRRATSDA DIARSAPATA SSPLPLLLRD ILEEDVVVVV DGAGRGKGND DDDKTSGRGG
101: GGGGHMDMGE YYRRVLRVEP ENPLVLRNYG RYLQEVEGDL GGAEECYARA LLASPDDGDL LSLYGQLLWE TSQDKDRAAA YLERAVQAAP DDCYVLGSYA
201: SFLWDAEEDE DDEAEDEMKP PLVPASC

Best Arabidopsis Sequence Match ( AT4G17940.1 )
(BLAST)

001: MKSLLMRTGS MPVLQNRLIS GGSSRKMTPI SRTNSVESLS SYGERFAGGK ISIEVKANVG MRRVLSESDV IRSERMLKRV GSKPSPARIP EDDEAGEEEI
101: RFADGWGSMI SGGLPVEEKC FTGGGVGGGS GYSGGYGNGG GGGYEDKSKI GDYYREMLRS NPNNSLLLMN YGKFLYEVEK DAEGAEEYYG RAILENPGDG
201: EALSMYGRLI WETKRDEKRA QGYFDQAVNA SPNDCMVLGS YARFMWEAED DDDDDEEEEE EEWMAASPLM VSAV

Arabidopsis Description

Tetratricopeptide repeat (TPR)-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WUZ1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.