Factsheet for Os10t0501900-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G172600.1	Wheat	plastid	61.98	65.41
TraesCS1B01G191700.1	Wheat	plastid	61.71	64.93
TraesCS1D01G166000.1	Wheat	plastid	60.88	64.24
EER93981	Sorghum	plastid	63.64	62.43
Zm00001d013919_P001	Maize	plastid	61.71	61.71
Zm00001d032535_P002	Maize	plastid	60.61	61.62
HORVU1Hr1G045530.3	Barley	cytosol	30.03	38.52
Os05t0447700-01	Rice	plastid	27.27	20.45
Os04t0510600-01	Rice	plastid	15.43	20.22
Os06t0606700-00	Rice	plastid	14.88	19.42
Os01t0855200-01	Rice	plastid	27.0	19.14
Os10t0576600-01	Rice	plastid	11.85	18.94
Os03t0140700-01	Rice	plastid	15.98	17.11
Os07t0542800-00	Rice	cytosol, mitochondrion, nucleus, plastid	10.47	15.45
Os04t0496700-00	Rice	nucleus	8.26	14.56
Os08t0382600-00	Rice	mitochondrion	6.89	14.29

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.2	EntrezGene:4349040	ProteinID:ABB47842.1	ProteinID:BAF26902.1	ProteinID:BAT11533.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150
GO:GO:0009987	GO:GO:0098869	InterPro:IPR011990	InterPro:IPR013026	EnsemblPlantsGene:Os10g0501900	EnsemblPlants:Os10t0501900-01
PFscan:PS50293	PANTHER:PTHR26312	PANTHER:PTHR26312:SF77	UniProt:Q337F8	SUPFAM:SSF48452	InterPro:TPR-contain_dom
InterPro:TPR-like_helical_dom_sf	UniParc:UPI00005E1F41	RefSeq:XP_015612874.1	SEG:seg	:	:

Description

Tetratricopeptide-like helical domain containing protein. (Os10t0501900-01)

Coordinates

chr10:+:19146523..19148132

Molecular Weight (calculated)

38419.5 Da

IEP (calculated)

4.429

GRAVY (calculated)

-0.124

Length

363 amino acids

Sequence
(BLAST)

001: MTPSAIVVGM PTRCAPPAFM AGVGRGRGRG GFFRPVVAAA AACGGGGGGG GGDEEQKRQI LPLPSMAAMP PSLRAIQAKR KLEAVRRGVV PRAAGTSAVA
101: ALVAAVEAVQ GAAAGGAAEA ARGAGDAMAW VIRKVHLESP DLAVGLLGLV ASCLGTVMEA EMDRIKRKNV EPSASVAAAA SNAAPDNDGG DTDQIEDADA
201: EMPELVELDM ETELWSRIGI MHSDDDTPVF VDDEDGLQEI IDIARVHRRK AAYERIIATA ADVNSLILSN YAQLLYQFDK DLDRAEDYFK QAVAAEPVDG
301: EAMRRYALFM WHARGDLAGA EDMFTRAIDE EPQSSQHRSS YAWFLWMTGG VETCLIDSGN DTE

Best Arabidopsis Sequence Match ( AT2G29670.2 )
(BLAST)

001: MGVKVASSST FLQWTTQPII HQSSSPSQTL ASGTITSPSK RRSTVHDGRF LSCRFVTQRL NRSALFGTPS TKLHRPKSCE LWKSSSSSSR PIKTQSFRRV
101: YSANLDPFSD EEFSKKIQEL TLRFNIPHHD DDENSIEPPW NEMVHLSSIE MKANSVDLPL SLRIIKKKRQ WEEGVKQAGE SACCSMNKAF SSMVFMIREL
201: QSFTLHMREI LFYEDLQEIL LRVREEMQQS FVWLFQQVFS ATPTLMVYVM ILLANFTVYS IGNNSSALAA VAPLPPTITE LTTVSETEET NVKFDSSVVK
301: TFFVSSPSGS IASVGGNNNG GGGNVKPVLS GTDGDGSDGS EQFRTIIPEG VSQLSSSNFG SEPSVSGQDE HRLWNSMVEE AERMQYSNID DSLDQETRKR
401: FVSHVEARVE AEEDTGYFKT ELMYQTELSQ EPNNPLLLAN YAQFLYLVSN DHDRAEEYFK RAVGVEPKDA EAFSKYATFL WRARDDLWAA EETFLEAIDA
501: DPTNSYYAAN YANFLWNTGG DDTCFPLDDE SHEDTI

Arabidopsis Description

At2g29670/T27A16.23 [Source:UniProtKB/TrEMBL;Acc:O82388]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.