Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os06t0606700-00 | Rice | plastid | 58.74 | 43.53 |
| GSMUA_Achr2P15930_001 | Banana | cytosol | 23.3 | 40.0 |
| Os07t0542800-00 | Rice | cytosol, mitochondrion, nucleus, plastid | 41.26 | 34.55 |
| TraesCS7D01G374500.1 | Wheat | mitochondrion | 44.17 | 32.16 |
| TraesCS7A01G377700.1 | Wheat | mitochondrion | 44.66 | 32.06 |
| TraesCS7B01G279400.1 | Wheat | mitochondrion | 45.15 | 31.74 |
| HORVU7Hr1G090280.1 | Barley | mitochondrion | 44.17 | 31.6 |
| Bra020090.1-P | Field mustard | cytosol | 26.21 | 27.84 |
| Zm00001d046530_P001 | Maize | plastid | 38.84 | 26.94 |
| EER88623 | Sorghum | mitochondrion | 40.29 | 25.94 |
| Solyc07g008210.2.1 | Tomato | cytosol, nucleus, plastid | 26.7 | 23.91 |
| PGSC0003DMT400079441 | Potato | plastid | 25.73 | 22.84 |
| KRH20249 | Soybean | plastid | 27.18 | 21.79 |
| PGSC0003DMT400073455 | Potato | plastid | 24.76 | 21.34 |
| KRH09728 | Soybean | cytosol | 11.65 | 21.24 |
| KRH03683 | Soybean | plastid | 26.7 | 21.07 |
| KRH23575 | Soybean | plastid | 26.21 | 21.01 |
| AT4G32340.1 | Thale cress | mitochondrion | 24.27 | 21.01 |
| Solyc03g116670.2.1 | Tomato | nucleus | 32.04 | 20.95 |
| Solyc06g068130.2.1 | Tomato | plastid | 24.27 | 20.83 |
| PGSC0003DMT400001660 | Potato | mitochondrion, nucleus, plastid | 32.04 | 20.62 |
| Os10t0576600-01 | Rice | plastid | 22.33 | 20.26 |
| VIT_09s0002g06810.t01 | Wine grape | cytosol | 29.13 | 19.61 |
| CDY45101 | Canola | plastid | 26.7 | 19.43 |
| CDX87295 | Canola | nucleus | 23.79 | 19.37 |
| CDX68837 | Canola | mitochondrion, plastid | 23.3 | 19.2 |
| VIT_11s0016g05430.t01 | Wine grape | plastid | 26.7 | 19.1 |
| CDX92483 | Canola | plastid | 25.73 | 18.93 |
| KRH44461 | Soybean | plastid | 28.64 | 18.73 |
| KRH47446 | Soybean | plastid | 28.64 | 18.73 |
| CDX75237 | Canola | plastid | 22.33 | 18.55 |
| Bra002280.1-P | Field mustard | plastid | 25.24 | 18.31 |
| CDY35827 | Canola | plastid | 25.24 | 17.87 |
| AT1G80130.1 | Thale cress | nucleus | 26.21 | 17.7 |
| Bra011339.1-P | Field mustard | plastid | 20.87 | 17.62 |
| AT5G20190.1 | Thale cress | plastid | 24.27 | 17.24 |
| Bra006547.1-P | Field mustard | plastid | 22.82 | 17.22 |
| CDY60380 | Canola | plastid | 22.33 | 17.16 |
| CDX88849 | Canola | plastid | 22.33 | 17.1 |
| Os04t0510600-01 | Rice | plastid | 21.84 | 16.25 |
| Bra008495.1-P | Field mustard | mitochondrion, nucleus | 23.79 | 16.23 |
| CDY39992 | Canola | nucleus | 23.79 | 16.01 |
| CDY41120 | Canola | mitochondrion | 23.3 | 15.64 |
| CDY37568 | Canola | nucleus | 23.79 | 15.61 |
| Bra035194.1-P | Field mustard | nucleus | 22.82 | 15.36 |
| Os03t0140700-01 | Rice | plastid | 22.82 | 13.86 |
| Os05t0447700-01 | Rice | plastid | 19.9 | 8.47 |
| Os01t0855200-01 | Rice | plastid | 20.87 | 8.4 |
| Os10t0501900-01 | Rice | plastid | 14.56 | 8.26 |
| Os08t0382600-00 | Rice | mitochondrion | 4.37 | 5.14 |
Protein Annotations
| EnsemblPlants:Os04t0496700-00 | EnsemblPlantsGene:Os04g0496700 | EntrezGene:107277775 | Gene3D:1.25.40.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR011990 | InterPro:TPR-like_helical_dom_sf | PANTHER:PTHR26312 | PANTHER:PTHR26312:SF75 | ProteinID:BAS89894.1 |
| ProteinID:CAD41253.2 | RefSeq:XP_015636967.1 | SEG:seg | SUPFAM:SSF48452 | UniParc:UPI00001B1666 | UniProt:Q7XUK1 |
| MapMan:35.2 | : | : | : | : | : |
Description
Similar to H0306B06.7 protein. (Os04t0496700-00)
Coordinates
chr4:+:24844235..24845039
Molecular Weight (calculated)
22529.9 Da
IEP (calculated)
11.566
GRAVY (calculated)
-0.763
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSTDGRGPE QSDGAAVPLR RFLMSTGLDA DMRRGREGDA ASVAVVEEGV GGGGGGRKVC NGGGDGRRDA NAYYRRMIQA DPANPLLLGN YARFLKEVEG
101: DAARAQEYWE RAIVANPGDG DALALYAGLV WETTRPRRRL LHLRKGPRHR SPAAAKPTAR RCRIQARRRR RPRRHVCAGD RDAAGHGLLR HRVLHCRRGH
201: GLAGMP
101: DAARAQEYWE RAIVANPGDG DALALYAGLV WETTRPRRRL LHLRKGPRHR SPAAAKPTAR RCRIQARRRR RPRRHVCAGD RDAAGHGLLR HRVLHCRRGH
201: GLAGMP
001: MKSLLMRTGS MPVLQNRLIS GGSSRKMTPI SRTNSVESLS SYGERFAGGK ISIEVKANVG MRRVLSESDV IRSERMLKRV GSKPSPARIP EDDEAGEEEI
101: RFADGWGSMI SGGLPVEEKC FTGGGVGGGS GYSGGYGNGG GGGYEDKSKI GDYYREMLRS NPNNSLLLMN YGKFLYEVEK DAEGAEEYYG RAILENPGDG
201: EALSMYGRLI WETKRDEKRA QGYFDQAVNA SPNDCMVLGS YARFMWEAED DDDDDEEEEE EEWMAASPLM VSAV
101: RFADGWGSMI SGGLPVEEKC FTGGGVGGGS GYSGGYGNGG GGGYEDKSKI GDYYREMLRS NPNNSLLLMN YGKFLYEVEK DAEGAEEYYG RAILENPGDG
201: EALSMYGRLI WETKRDEKRA QGYFDQAVNA SPNDCMVLGS YARFMWEAED DDDDDEEEEE EEWMAASPLM VSAV
Arabidopsis Description
Tetratricopeptide repeat (TPR)-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WUZ1]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.