Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 2
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os04t0496700-00 | Rice | nucleus | 34.55 | 41.26 |
| GSMUA_Achr2P15930_001 | Banana | cytosol | 19.51 | 40.0 |
| Os06t0606700-00 | Rice | plastid | 40.24 | 35.61 |
| TraesCS7B01G279400.1 | Wheat | mitochondrion | 37.4 | 31.4 |
| HORVU7Hr1G090280.1 | Barley | mitochondrion | 36.59 | 31.25 |
| TraesCS7A01G377700.1 | Wheat | mitochondrion | 36.18 | 31.01 |
| TraesCS7D01G374500.1 | Wheat | mitochondrion | 34.96 | 30.39 |
| Zm00001d046530_P001 | Maize | plastid | 30.89 | 25.59 |
| Bra020090.1-P | Field mustard | cytosol | 19.92 | 25.26 |
| EER88623 | Sorghum | mitochondrion | 31.3 | 24.06 |
| KRH09728 | Soybean | cytosol | 10.16 | 22.12 |
| Solyc06g068130.2.1 | Tomato | plastid | 21.54 | 22.08 |
| PGSC0003DMT400079441 | Potato | plastid | 20.73 | 21.98 |
| PGSC0003DMT400073455 | Potato | plastid | 21.14 | 21.76 |
| Solyc03g116670.2.1 | Tomato | nucleus | 27.24 | 21.27 |
| KRH20249 | Soybean | plastid | 21.95 | 21.01 |
| Solyc07g008210.2.1 | Tomato | cytosol, nucleus, plastid | 19.51 | 20.87 |
| PGSC0003DMT400001660 | Potato | mitochondrion, nucleus, plastid | 26.83 | 20.62 |
| KRH23575 | Soybean | plastid | 21.54 | 20.62 |
| KRH03683 | Soybean | plastid | 21.54 | 20.31 |
| CDY45101 | Canola | plastid | 22.76 | 19.79 |
| AT4G32340.1 | Thale cress | mitochondrion | 18.7 | 19.33 |
| Bra011339.1-P | Field mustard | plastid | 19.11 | 19.26 |
| CDX68837 | Canola | mitochondrion, plastid | 19.51 | 19.2 |
| Bra006547.1-P | Field mustard | plastid | 21.14 | 19.05 |
| CDY60380 | Canola | plastid | 20.73 | 19.03 |
| Bra002280.1-P | Field mustard | plastid | 21.95 | 19.01 |
| CDX87295 | Canola | nucleus | 19.51 | 18.97 |
| AT5G20190.1 | Thale cress | plastid | 22.36 | 18.97 |
| CDX88849 | Canola | plastid | 20.73 | 18.96 |
| VIT_09s0002g06810.t01 | Wine grape | cytosol | 23.58 | 18.95 |
| CDX75237 | Canola | plastid | 19.11 | 18.95 |
| Os10t0576600-01 | Rice | plastid | 17.48 | 18.94 |
| CDX92483 | Canola | plastid | 21.54 | 18.93 |
| CDY35827 | Canola | plastid | 22.36 | 18.9 |
| VIT_11s0016g05430.t01 | Wine grape | plastid | 21.95 | 18.75 |
| KRH47446 | Soybean | plastid | 23.98 | 18.73 |
| KRH44461 | Soybean | plastid | 23.17 | 18.1 |
| Os04t0510600-01 | Rice | plastid | 18.29 | 16.25 |
| AT1G80130.1 | Thale cress | nucleus | 19.92 | 16.07 |
| CDY39992 | Canola | nucleus | 19.51 | 15.69 |
| Bra035194.1-P | Field mustard | nucleus | 19.11 | 15.36 |
| Os03t0140700-01 | Rice | plastid | 21.14 | 15.34 |
| Bra008495.1-P | Field mustard | mitochondrion, nucleus | 18.7 | 15.23 |
| CDY41120 | Canola | mitochondrion | 18.7 | 14.98 |
| CDY37568 | Canola | nucleus | 18.7 | 14.65 |
| Os10t0501900-01 | Rice | plastid | 15.45 | 10.47 |
| Os05t0447700-01 | Rice | plastid | 16.26 | 8.26 |
| Os01t0855200-01 | Rice | plastid | 16.67 | 8.01 |
| Os08t0382600-00 | Rice | mitochondrion | 2.85 | 4.0 |
Protein Annotations
| EnsemblPlants:Os07t0542800-00 | EnsemblPlantsGene:Os07g0542800 | Gene3D:1.25.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR011990 | InterPro:TPR-like_helical_dom_sf | PANTHER:PTHR26312 | PANTHER:PTHR26312:SF75 | ProteinID:BAT01983.1 | SEG:seg |
| SUPFAM:SSF48452 | UniParc:UPI000393BB70 | UniProt:A0A0P0X796 | MapMan:35.2 | : | : |
Description
Similar to H0306B06.7 protein. (Os07t0542800-00)
Coordinates
chr7:+:21457006..21460283
Molecular Weight (calculated)
26794.6 Da
IEP (calculated)
10.385
GRAVY (calculated)
-0.540
Length
246 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAESAWDTR GPHMSAYHVN SLFPLSFFSS FFTPSRRCSI HGVEVEEANC RHRQAGLLRR ARRSHRVTVR RALEPAPALR HGELRVHLRS RATVACSSSM
101: AAAAAPRPQA TRRPWQSSRR ASGEEVAGGR CATAAAGGGG EGRDGRCDAD VHCQRMIQAN PTNPLLLGNY ARFLKKVERD AARAQEYCEH AIVANPGDGD
201: ALALYAGLVW ETTRDTDRTD AYFTRGRGPA TARPPPPSRL LDVAAP
101: AAAAAPRPQA TRRPWQSSRR ASGEEVAGGR CATAAAGGGG EGRDGRCDAD VHCQRMIQAN PTNPLLLGNY ARFLKKVERD AARAQEYCEH AIVANPGDGD
201: ALALYAGLVW ETTRDTDRTD AYFTRGRGPA TARPPPPSRL LDVAAP
001: MLLRSASTPL LNSLVHVSSP RDSPIETVES VHQIQRHRSI TLSASSSSCC YSPMSVHSSD DSSRRMKRTA SDSDLRHLTS TKPPVSKFLS GGALMEDVDE
101: GIGFGLIRTS SYDGISWALD EDTEVAGGGG GGMFHGGGKG RSGGRSDGGD GGDDNTDVHY RKMIEANPGN GIFLSNYAKF LKEVRKDYLK AEEYCGRAIL
201: VSPNDGNVLA MYAELVWKIH KDSSRAENYF NQAVAAAPED CYVQASYARF LWDAEEEEEE EKEERHEEEL EHQTSRMNFF TGPSPITAMS
101: GIGFGLIRTS SYDGISWALD EDTEVAGGGG GGMFHGGGKG RSGGRSDGGD GGDDNTDVHY RKMIEANPGN GIFLSNYAKF LKEVRKDYLK AEEYCGRAIL
201: VSPNDGNVLA MYAELVWKIH KDSSRAENYF NQAVAAAPED CYVQASYARF LWDAEEEEEE EKEERHEEEL EHQTSRMNFF TGPSPITAMS
Arabidopsis Description
Tetratricopeptide repeat (TPR)-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4K464]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.