Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 6
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX75237 | Canola | plastid | 78.99 | 75.81 |
| Bra011339.1-P | Field mustard | plastid | 77.31 | 75.41 |
| CDX68837 | Canola | mitochondrion, plastid | 78.99 | 75.2 |
| GSMUA_Achr2P15930_001 | Banana | cytosol | 23.95 | 47.5 |
| PGSC0003DMT400073455 | Potato | plastid | 35.29 | 35.15 |
| Solyc06g068130.2.1 | Tomato | plastid | 34.03 | 33.75 |
| Os06t0606700-00 | Rice | plastid | 38.24 | 32.73 |
| AT1G80130.1 | Thale cress | nucleus | 41.6 | 32.46 |
| Zm00001d046530_P001 | Maize | plastid | 40.34 | 32.32 |
| TraesCS7D01G374500.1 | Wheat | mitochondrion | 37.82 | 31.8 |
| Solyc03g116670.2.1 | Tomato | nucleus | 42.02 | 31.75 |
| AT5G20190.1 | Thale cress | plastid | 38.66 | 31.72 |
| HORVU7Hr1G090280.1 | Barley | mitochondrion | 38.24 | 31.6 |
| TraesCS7A01G377700.1 | Wheat | mitochondrion | 37.82 | 31.36 |
| PGSC0003DMT400001660 | Potato | mitochondrion, nucleus, plastid | 40.76 | 30.31 |
| TraesCS7B01G279400.1 | Wheat | mitochondrion | 36.97 | 30.03 |
| EER88623 | Sorghum | mitochondrion | 39.92 | 29.69 |
| AT4G17940.1 | Thale cress | mitochondrion | 33.61 | 29.2 |
| Os04t0496700-00 | Rice | nucleus | 21.01 | 24.27 |
| AT1G04530.1 | Thale cress | cytoskeleton, cytosol, nucleus | 25.63 | 19.68 |
| Os07t0542800-00 | Rice | cytosol, mitochondrion, nucleus, plastid | 19.33 | 18.7 |
| AT1G07280.1 | Thale cress | plastid | 24.79 | 10.69 |
| AT2G29670.2 | Thale cress | plastid | 23.95 | 10.63 |
| AT3G47080.1 | Thale cress | plastid | 20.59 | 9.51 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:35.2 | EntrezGene:829368 | ProteinID:AEE86043.1 | ArrayExpress:AT4G32340 | EnsemblPlantsGene:AT4G32340 |
| RefSeq:AT4G32340 | TAIR:AT4G32340 | RefSeq:AT4G32340-TAIR-G | EnsemblPlants:AT4G32340.1 | TAIR:AT4G32340.1 | EMBL:AY087384 |
| EMBL:AY150386 | ProteinID:CAA16957.1 | ProteinID:CAA22561.1 | ProteinID:CAB79951.1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR011990 | RefSeq:NP_194960.1 | UniProt:O49358 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR26312 | PANTHER:PTHR26312:SF73 |
| SUPFAM:SSF48452 | InterPro:TPR-like_helical_dom_sf | UniParc:UPI00000AC038 | SEG:seg | : | : |
Description
Tetratricopeptide repeat (TPR)-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:O49358]
Coordinates
chr4:-:15612337..15614544
Molecular Weight (calculated)
25622.5 Da
IEP (calculated)
4.707
GRAVY (calculated)
-0.602
Length
238 amino acids
Sequence
(BLAST)
(BLAST)
001: MIMRSASSLD LNLRAAQKPS VPRVVTTART VSAATPRVAK PITRASSDGN LYKIQSPESI TKTISVYHEE TASLRVLEGS RLPQGGSNGG FGGRGGDGAG
101: GGGGGGGGSV DGYYEEMIQR YPGDTLLLSN YARFLKEVKG DGRKAEEYCE RAMLSESGRD GELLSMYGDL IWKNHGDGVR AQSYYDQAVQ SSPDDCNVLA
201: SYARFLWDAE EEVEEEESKH HEDGFSDSTY NPSVSVVS
101: GGGGGGGGSV DGYYEEMIQR YPGDTLLLSN YARFLKEVKG DGRKAEEYCE RAMLSESGRD GELLSMYGDL IWKNHGDGVR AQSYYDQAVQ SSPDDCNVLA
201: SYARFLWDAE EEVEEEESKH HEDGFSDSTY NPSVSVVS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.