Factsheet for AT1G07280.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06694	Canola	plastid	77.72	83.46
Bra015570.1-P	Field mustard	plastid	77.54	83.27
CDY10264	Canola	plastid	76.63	81.82
CDY06247	Canola	plastid	70.83	78.99
Bra031567.1-P	Field mustard	plastid	70.83	78.99
CDY09927	Canola	plastid	69.57	77.58
AT2G29670.2	Thale cress	plastid	65.04	66.98
VIT_06s0004g06290.t01	Wine grape	plastid	56.34	58.79
KRG98335	Soybean	plastid	52.54	54.51
Solyc06g076850.2.1	Tomato	plastid	54.17	54.27
PGSC0003DMT400078227	Potato	plastid	54.17	54.07
KRH46437	Soybean	plastid	51.27	53.9
GSMUA_Achr8P02280_001	Banana	plastid	42.03	46.4
AT3G47080.1	Thale cress	plastid	42.93	46.02
GSMUA_Achr9P03650_001	Banana	plastid	41.67	45.36
Os01t0855200-01	Rice	plastid	40.04	43.16
TraesCS3B01G400100.1	Wheat	plastid	37.14	42.8
TraesCS3D01G361500.1	Wheat	plastid	37.14	42.71
TraesCS3A01G368600.1	Wheat	plastid	36.96	42.41
GSMUA_Achr11P...	Banana	plastid	38.22	42.28
Zm00001d012325_P001	Maize	plastid	39.49	42.25
GSMUA_Achr6P33690_001	Banana	plastid	40.76	42.13
HORVU3Hr1G084970.2	Barley	plastid	36.78	42.03
Zm00001d042812_P001	Maize	plastid	39.67	41.87
EES01775	Sorghum	plastid	40.04	41.7
TraesCS1D01G277900.1	Wheat	plastid	35.69	41.56
TraesCS1B01G287500.1	Wheat	plastid	36.05	41.54
Os05t0447700-01	Rice	plastid	36.41	41.53
TraesCS1A01G278600.1	Wheat	plastid	35.14	41.28
KXG22120	Sorghum	plastid	37.68	40.78
Zm00001d038274_P002	Maize	plastid	36.41	40.04
HORVU1Hr1G073460.2	Barley	plastid	36.23	39.06
Zm00001d010075_P001	Maize	plastid	37.14	39.05
GSMUA_Achr5P28840_001	Banana	cytosol	38.59	37.97
AT4G32340.1	Thale cress	mitochondrion	10.69	24.79
AT5G20190.1	Thale cress	plastid	11.78	22.41
AT4G17940.1	Thale cress	mitochondrion	10.33	20.8
AT1G80130.1	Thale cress	nucleus	11.41	20.66
AT1G04530.1	Thale cress	cytoskeleton, cytosol, nucleus	8.51	15.16

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.2	EntrezGene:837239	ProteinID:AEE28100.1	ProteinID:AEE28101.1	ProteinID:AEE28102.1
ArrayExpress:AT1G07280	EnsemblPlantsGene:AT1G07280	RefSeq:AT1G07280	TAIR:AT1G07280	RefSeq:AT1G07280-TAIR-G	EnsemblPlants:AT1G07280.1
TAIR:AT1G07280.1	EMBL:AY065061	EMBL:AY133574	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0008150	InterPro:IPR011990	InterPro:IPR013026	RefSeq:NP_001030984.1	RefSeq:NP_001117242.1	RefSeq:NP_172208.2
PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078
PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098
PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019
PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030
PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PFscan:PS50293
PANTHER:PTHR26312	PANTHER:PTHR26312:SF83	UniProt:Q8VZC8	SUPFAM:SSF48452	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf
UniParc:UPI00000A4F2F	SEG:seg	:	:	:	:

Description

At1g07280/F22G5_32 [Source:UniProtKB/TrEMBL;Acc:Q8VZC8]

Coordinates

chr1:+:2238017..2241471

Molecular Weight (calculated)

61787.4 Da

IEP (calculated)

5.107

GRAVY (calculated)

-0.430

Length

552 amino acids

Sequence
(BLAST)

001: MGVKVATSST FHQWVAHPIV HHSSSLSQTL ASSAVSSPSR RRIIGNDGRS SLSCRSVMQS QRLNPSSPFG TSSTNLRHSK SCELWESTKR PKTQLIRRAF
101: SANVDPFSEE EFAKKMQELT LKFQVSNEEE DNESDTRIDD YTRKMDIVGS HNNFRSDSME PPWPEMVQMS NIERKANSVD LPLSLRIIKR KLQMEEGVLN
201: QVGESACCSV KKAFSSMVFM IRELQSFTLH MRELLLFEDL QGILHRVRKE MQASFVWLFQ QVFSATPTLM VSVMILLANF TVYSIESNSA LAAAVSPPTT
301: LSFSFETTAE ISETQETNQK FDSSMVKTFS VSSPYGKTSF VGGGGGNNIP PPVQSGTDGD GSDQFRKSQF SSSSLGATSA DSDVSVSGQE EIRLWNSILE
401: ETAKMETLDH ETMKGMVSPV EARLEAEESM DYFKTELLYQ TGLSQEPGNV LLLANYAQFL YLIIHDYDRA EKYFKRAAKA EPADAEALNK YATFLWRARN
501: DIWRAEETYL EAISADPTNS VYSANYAHFL WNTGGDETCF PLDAPSQQNN TT

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.