Factsheet for TraesCS3A01G368600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G361500.1	Wheat	plastid	97.3	97.5
TraesCS3B01G400100.1	Wheat	plastid	96.88	97.29
HORVU3Hr1G084970.2	Barley	plastid	93.56	93.17
Os01t0855200-01	Rice	plastid	81.29	76.37
Zm00001d042812_P001	Maize	plastid	75.47	69.41
Zm00001d012325_P001	Maize	plastid	73.39	68.41
EES01775	Sorghum	plastid	74.22	67.36
TraesCS1A01G278600.1	Wheat	plastid	59.88	61.28
CDY02002	Canola	cytosol, mitochondrion, nucleus	16.01	50.66
GSMUA_Achr8P02280_001	Banana	plastid	48.23	46.4
GSMUA_Achr9P03650_001	Banana	plastid	48.65	46.15
GSMUA_Achr6P33690_001	Banana	plastid	48.86	44.01
GSMUA_Achr11P...	Banana	plastid	45.32	43.69
Bra018368.1-P	Field mustard	plastid	41.37	42.61
VIT_06s0004g06290.t01	Wine grape	plastid	46.36	42.16
CDY51354	Canola	plastid	41.37	41.29
KRG98335	Soybean	plastid	45.32	40.98
Bra039995.1-P	Field mustard	plastid	41.37	40.95
CDX97868	Canola	plastid	42.41	40.64
CDY06247	Canola	plastid	41.79	40.61
Bra031567.1-P	Field mustard	plastid	41.79	40.61
AT2G29670.2	Thale cress	plastid	45.11	40.49
Bra015570.1-P	Field mustard	plastid	43.24	40.47
CDY10264	Canola	plastid	43.45	40.43
CDY06694	Canola	plastid	43.04	40.27
KRH46437	Soybean	plastid	43.45	39.81
Solyc06g076850.2.1	Tomato	plastid	45.53	39.75
PGSC0003DMT400078227	Potato	plastid	45.53	39.6
CDY09927	Canola	plastid	40.54	39.39
GSMUA_Achr5P28840_001	Banana	cytosol	44.7	38.32
AT1G07280.1	Thale cress	plastid	42.41	36.96
Bra019495.1-P	Field mustard	plastid	34.3	35.64
CDX99068	Canola	plastid	33.89	35.59
Bra018168.1-P	Field mustard	plastid	33.89	35.59
CDX86126	Canola	plastid	35.14	34.77
CDY58299	Canola	plastid	34.93	34.64
CDY38075	Canola	plastid	29.94	33.96
AT3G47080.1	Thale cress	plastid	35.97	33.59
TraesCS1A01G172600.1	Wheat	plastid	18.71	26.16
TraesCS1A01G194200.1	Wheat	plastid	12.47	25.42
TraesCS2A01G367000.1	Wheat	plastid	13.31	23.7
TraesCS7A01G377700.1	Wheat	mitochondrion	13.31	22.3
TraesCS5A01G512000.1	Wheat	mitochondrion, plastid	13.51	20.7

Protein Annotations

EnsemblPlants:TraesCS3A01G368600.1	EnsemblPlantsGene:TraesCS3A01G368600	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR011990	InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR26312	PANTHER:PTHR26312:SF83	SEG:seg	SUPFAM:SSF48452
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr3A:+:617532500..617534038

Molecular Weight (calculated)

52022.2 Da

IEP (calculated)

5.210

GRAVY (calculated)

-0.263

Length

481 amino acids

Sequence
(BLAST)

001: MGIQVAPPSS PSSLGGGCVR LSRAQSSSSL ATWSAGIARR RAGHAMVTRA VSASIDSVGS HGRDDEEFLR RIQELAVGLH PGAGGCGWPA SVERSASSVG
101: LPLSLRMLKR KKRQQGQRGR WDERLLDRAG ESGSGRGAVG RAFSSMVLII RELQSFALQM RQTLFYEDMQ SVLARVHAEM DASFVWLFQH IFAGTPALMV
201: SVMLLLANFT VYSMGDNIAM AANLPPPQPT VAAVAMLDAQ HAEQSRPDQR FDSVSLNMFS IGRTASVDGN SGGGGKAPPV AGATGDDRSD ESSYRQSGAV
301: LPQDESQATP VGAAAEDTED ELIIWKRIAD EATRMQASVR VEALMDPDIL AQLVAPVEAK MDTEDLADHA KTEQRYAMAV SEEPSNALLL ANFAQFLYLV
401: QRDHDRAEHY FKRAVRAEQP ADAETLGWYA TFLWKARNDL AAAEETFQEA IAAEPSNGHH AAAYAHFLWN TGGEDTCYPL D

Best Arabidopsis Sequence Match ( AT1G07280.2 )
(BLAST)

001: MGVKVATSST FHQWVAHPIV HHSSSLSQTL ASSAVSSPSR RRIIGNDGRS SLSCRSVMQS QRLNPSSPFG TSSTNLRHSK SCELWESTKR PKTQLIRRAF
101: SANVDPFSEE EFAKKMQELT LKFQVSNEEE DNESDTRIDD YTRKMDIVGS HNNFRSDSME PPWPEMVQMS NIERKANSVD LPLSLRIIKR KLQMEEGVLN
201: QVGESACCSV KKAFSSMVFM IRELQSFTLH MRELLLFEDL QGILHRVRKE MQASFVWLFQ QVFSATPTLM VSVMILLANF TVYSIESNSA LAAAVSPPTT
301: LSFSFETTAE ISETQETNQK FDSSMVKTFS VSSPYGKTSF VGGGGGNNIP PPVQSGTDGD GSDQFRKSQF SSSSLGATSA DSDVSVSGQE EIRLWNSILE
401: ETAKMETLDH ETMKGMVSPV EARLEAEESM DYFKTELLYQ TGLSQEPGNV LLLANYAQFL YLIIHDYDRA EKYFKRAAKA EPADAEALNK YATFLWRARN
501: DIWRAEETYL EAISADPTNS VYSANYAHFL WNTGGDETCF PLDAPSQQNN TT

Arabidopsis Description

At1g07280/F22G5_32 [Source:UniProtKB/TrEMBL;Acc:Q8VZC8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.