Factsheet for Bra039995.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51354	Canola	plastid	98.97	99.79
Bra018368.1-P	Field mustard	plastid	74.07	77.09
AT2G29670.2	Thale cress	plastid	76.75	69.59
Bra015570.1-P	Field mustard	plastid	62.55	59.14
VIT_06s0004g06290.t01	Wine grape	plastid	60.29	55.39
Bra031567.1-P	Field mustard	plastid	56.17	55.15
KRG98335	Soybean	plastid	57.41	52.44
KRH46437	Soybean	plastid	55.35	51.24
Solyc06g076850.2.1	Tomato	plastid	55.76	49.18
PGSC0003DMT400078227	Potato	plastid	55.76	49.01
Bra018168.1-P	Field mustard	plastid	45.27	48.03
GSMUA_Achr8P02280_001	Banana	plastid	46.71	45.4
Bra019495.1-P	Field mustard	plastid	43.21	45.36
GSMUA_Achr9P03650_001	Banana	plastid	45.68	43.79
TraesCS3B01G400100.1	Wheat	plastid	41.36	41.96
Os05t0447700-01	Rice	plastid	41.77	41.94
GSMUA_Achr6P33690_001	Banana	plastid	45.88	41.76
TraesCS1B01G287500.1	Wheat	plastid	41.15	41.75
TraesCS3D01G361500.1	Wheat	plastid	41.15	41.67
HORVU3Hr1G084970.2	Barley	plastid	41.15	41.41
TraesCS3A01G368600.1	Wheat	plastid	40.95	41.37
TraesCS1D01G277900.1	Wheat	plastid	40.33	41.35
GSMUA_Achr11P...	Banana	plastid	42.39	41.28
Zm00001d012325_P001	Maize	plastid	43.62	41.09
TraesCS1A01G278600.1	Wheat	plastid	39.71	41.06
Os01t0855200-01	Rice	plastid	43.21	41.02
Zm00001d042812_P001	Maize	plastid	43.21	40.15
EES01775	Sorghum	plastid	43.42	39.81
HORVU1Hr1G073460.2	Barley	plastid	40.53	38.48
KXG22120	Sorghum	plastid	39.71	37.84
Zm00001d038274_P002	Maize	plastid	38.68	37.45
Zm00001d010075_P001	Maize	plastid	39.3	36.38
GSMUA_Achr5P28840_001	Banana	cytosol	41.77	36.19
Bra020090.1-P	Field mustard	cytosol	11.93	29.9
Bra013269.1-P	Field mustard	mitochondrion	11.93	25.33
Bra006547.1-P	Field mustard	plastid	13.99	24.91
Bra021028.1-P	Field mustard	plastid	12.76	23.57
Bra002280.1-P	Field mustard	plastid	13.58	23.24
Bra011339.1-P	Field mustard	plastid	11.52	22.95
Bra035194.1-P	Field mustard	nucleus	11.73	18.63
Bra008495.1-P	Field mustard	mitochondrion, nucleus	10.91	17.55
Bra015324.1-P	Field mustard	nucleus	10.91	16.61

Protein Annotations

EnsemblPlants:Bra039995.1	EnsemblPlants:Bra039995.1-P	EnsemblPlantsGene:Bra039995	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf
InterPro:TPR_repeat	PANTHER:PTHR26312	PANTHER:PTHR26312:SF83	PFscan:PS50005	PFscan:PS50293	SEG:seg
SUPFAM:SSF48452	UniParc:UPI0002544416	UniProt:M4FFX1	MapMan:35.2	:	:

Description

AT2G29670 (E=1e-125) | binding

Coordinates

chrA04:-:13272123..13274497

Molecular Weight (calculated)

54744.9 Da

IEP (calculated)

4.782

GRAVY (calculated)

-0.434

Length

486 amino acids

Sequence
(BLAST)

001: MGVKVAYTSP FLQWAAHSSS PSKRRHNAPF PSCQRLNRSA LFGTPTKLHR SKSCELWQPP TPTRTHSIRR VSTASLDPFS DEEFSKKIQE LTLRFHDERE
101: QQQQPPWHEI EMKANSVDLP LSIRIIKKKR KWEEGVKKSK AFSSMSKAFS SMVFMIRELQ SFTLHMREVL FYEDLQGILL RVREEMHASF VWLFQQVFSA
201: TPTLMVYVMI LLANFTVYSI SSNSALAAAT APPQITTVTE LTTDSSVVKT FFVSSPNGNT ASVGGNNNGG GGNVRPVLNG ADGDDGSEQF KTIIPEGVSS
301: TLGSTTTESE ETSVSGQDEL RLWNSVVEEA EEMHFSNTDS ALLDHETRKR FVSPLDARVE EADGEIDYFR TELLYQTGLS QEPNNPLLLA NYAQFLYIVS
401: NDYDRAEEFF KRAVGVEPKD AEALSKYATF LWRARDDLWA AEETFLEAID ADPTNSFYAA NYANFLWNTG GDETCFPLDE SQEDTI

Best Arabidopsis Sequence Match ( AT2G29670.2 )
(BLAST)

001: MGVKVASSST FLQWTTQPII HQSSSPSQTL ASGTITSPSK RRSTVHDGRF LSCRFVTQRL NRSALFGTPS TKLHRPKSCE LWKSSSSSSR PIKTQSFRRV
101: YSANLDPFSD EEFSKKIQEL TLRFNIPHHD DDENSIEPPW NEMVHLSSIE MKANSVDLPL SLRIIKKKRQ WEEGVKQAGE SACCSMNKAF SSMVFMIREL
201: QSFTLHMREI LFYEDLQEIL LRVREEMQQS FVWLFQQVFS ATPTLMVYVM ILLANFTVYS IGNNSSALAA VAPLPPTITE LTTVSETEET NVKFDSSVVK
301: TFFVSSPSGS IASVGGNNNG GGGNVKPVLS GTDGDGSDGS EQFRTIIPEG VSQLSSSNFG SEPSVSGQDE HRLWNSMVEE AERMQYSNID DSLDQETRKR
401: FVSHVEARVE AEEDTGYFKT ELMYQTELSQ EPNNPLLLAN YAQFLYLVSN DHDRAEEYFK RAVGVEPKDA EAFSKYATFL WRARDDLWAA EETFLEAIDA
501: DPTNSYYAAN YANFLWNTGG DDTCFPLDDE SHEDTI

Arabidopsis Description

At2g29670/T27A16.23 [Source:UniProtKB/TrEMBL;Acc:O82388]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.