Factsheet for Os05t0447700-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G277900.1	Wheat	plastid	77.69	79.32
TraesCS1A01G278600.1	Wheat	plastid	76.03	78.3
TraesCS1B01G287500.1	Wheat	plastid	77.07	77.87
KXG22120	Sorghum	plastid	80.58	76.47
Zm00001d038274_P002	Maize	plastid	78.1	75.3
HORVU1Hr1G073460.2	Barley	plastid	76.65	72.46
Zm00001d010075_P001	Maize	plastid	75.21	69.33
Os01t0855200-01	Rice	plastid	70.66	66.8
Os08t0382600-00	Rice	mitochondrion	23.55	65.14
CDY02002	Canola	cytosol, mitochondrion, nucleus	16.74	53.29
GSMUA_Achr9P03650_001	Banana	plastid	49.38	47.14
GSMUA_Achr8P02280_001	Banana	plastid	48.35	46.8
GSMUA_Achr11P...	Banana	plastid	46.28	44.89
GSMUA_Achr6P33690_001	Banana	plastid	48.76	44.19
VIT_06s0004g06290.t01	Wine grape	plastid	46.9	42.91
Bra018368.1-P	Field mustard	plastid	41.12	42.61
KRG98335	Soybean	plastid	46.69	42.48
KRH46437	Soybean	plastid	45.87	42.29
CDY51354	Canola	plastid	41.94	42.12
Bra039995.1-P	Field mustard	plastid	41.94	41.77
CDX97868	Canola	plastid	42.77	41.24
AT2G29670.2	Thale cress	plastid	44.21	39.93
CDY10264	Canola	plastid	42.36	39.65
Bra015570.1-P	Field mustard	plastid	41.94	39.49
CDY06694	Canola	plastid	41.74	39.3
Solyc06g076850.2.1	Tomato	plastid	44.42	39.02
PGSC0003DMT400078227	Potato	plastid	44.21	38.7
Bra031567.1-P	Field mustard	plastid	39.26	38.38
CDY06247	Canola	plastid	39.26	38.38
CDY09927	Canola	plastid	38.02	37.17
Bra018168.1-P	Field mustard	plastid	34.5	36.46
AT1G07280.1	Thale cress	plastid	41.53	36.41
CDX99068	Canola	plastid	34.3	36.24
GSMUA_Achr5P28840_001	Banana	cytosol	41.53	35.83
CDX86126	Canola	plastid	35.54	35.39
AT3G47080.1	Thale cress	plastid	36.36	34.17
Bra019495.1-P	Field mustard	plastid	32.64	34.13
CDY38075	Canola	plastid	29.34	33.49
CDY58299	Canola	plastid	33.47	33.4
Os10t0501900-01	Rice	plastid	20.45	27.27
Os06t0606700-00	Rice	plastid	13.43	23.38
Os10t0576600-01	Rice	plastid	10.54	22.47
Os04t0510600-01	Rice	plastid	12.19	21.3
Os04t0496700-00	Rice	nucleus	8.47	19.9
Os03t0140700-01	Rice	plastid	13.84	19.76
Os07t0542800-00	Rice	cytosol, mitochondrion, nucleus, plastid	8.26	16.26

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.2	ProteinID:AAU10760.1	EMBL:AK071331	EMBL:AK072154	ProteinID:BAF17609.1
ProteinID:BAS94302.1	ProteinID:EEE63907.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006139
GO:GO:0006396	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	InterPro:HAT	InterPro:IPR011990
InterPro:IPR013026	EnsemblPlantsGene:Os05g0447700	EnsemblPlants:Os05t0447700-01	PFscan:PS50293	PANTHER:PTHR26312	PANTHER:PTHR26312:SF83
UniProt:Q688J0	SMART:SM00386	SUPFAM:SSF48452	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	UniParc:UPI000042AC00
SEG:seg	:	:	:	:	:

Description

Tetratricopeptide-like helical domain containing protein. (Os05t0447700-01)

Coordinates

chr5:-:21963794..21966003

Molecular Weight (calculated)

51248.3 Da

IEP (calculated)

5.311

GRAVY (calculated)

-0.165

Length

484 amino acids

Sequence
(BLAST)

001: MGLQVAAVAP SPCARSSASS SPPSTSSSRP ALGGAGLARS RAPVNWGAGV MARRRGLRQP ARCALSASLD GVGGGDAEFL RRIEELAAAV GVQPTGCGWP
101: ASVERSASSA GMPLSLRMLK RKKQQQQLVA RQTRWDERLL GSAGDSVGRA FSSMVLIVRE LQSFALQQMR EAMLGDDLQS VLARVHGEMH ASFVWLFQHI
201: FAGTPALMVS LMLLLANFTV HSMGHSVAAA AAIPPAPPTS AAVAVVDTQH ADPSLPRFDA ASVKTFSIGR AASVGGSSGG GGKVRPVAGA TGDDRWDESL
301: ARLSGVAPQQ PAPPAGTGAG MAVDEQAIWE RMVAEASNMQ ENARAEELSD PDVLGNLVAP VEAEIETEGH AEYTRTEQRY ELAVSEEPNN PLILANFAQF
401: LYLVQNDHDR AEQYFERAVR AEPADAEALS RYATFLWKAR NDLAAAEDTY QEAIAADPGN AHHAAAYAHF LWNTGGEDTC FPLD

Best Arabidopsis Sequence Match ( AT2G29670.2 )
(BLAST)

001: MGVKVASSST FLQWTTQPII HQSSSPSQTL ASGTITSPSK RRSTVHDGRF LSCRFVTQRL NRSALFGTPS TKLHRPKSCE LWKSSSSSSR PIKTQSFRRV
101: YSANLDPFSD EEFSKKIQEL TLRFNIPHHD DDENSIEPPW NEMVHLSSIE MKANSVDLPL SLRIIKKKRQ WEEGVKQAGE SACCSMNKAF SSMVFMIREL
201: QSFTLHMREI LFYEDLQEIL LRVREEMQQS FVWLFQQVFS ATPTLMVYVM ILLANFTVYS IGNNSSALAA VAPLPPTITE LTTVSETEET NVKFDSSVVK
301: TFFVSSPSGS IASVGGNNNG GGGNVKPVLS GTDGDGSDGS EQFRTIIPEG VSQLSSSNFG SEPSVSGQDE HRLWNSMVEE AERMQYSNID DSLDQETRKR
401: FVSHVEARVE AEEDTGYFKT ELMYQTELSQ EPNNPLLLAN YAQFLYLVSN DHDRAEEYFK RAVGVEPKDA EAFSKYATFL WRARDDLWAA EETFLEAIDA
501: DPTNSYYAAN YANFLWNTGG DDTCFPLDDE SHEDTI

Arabidopsis Description

At2g29670/T27A16.23 [Source:UniProtKB/TrEMBL;Acc:O82388]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.