Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G377700.1 | Wheat | mitochondrion | 91.32 | 91.64 |
| TraesCS7D01G374500.1 | Wheat | mitochondrion | 88.54 | 90.11 |
| TraesCS7B01G279400.1 | Wheat | mitochondrion | 90.62 | 89.08 |
| Os06t0606700-00 | Rice | plastid | 63.54 | 65.83 |
| GSMUA_Achr2P15930_001 | Banana | cytosol | 26.04 | 62.5 |
| Zm00001d046530_P001 | Maize | plastid | 60.07 | 58.25 |
| EER88623 | Sorghum | mitochondrion | 59.72 | 53.75 |
| KRH20249 | Soybean | plastid | 40.28 | 45.14 |
| Bra020090.1-P | Field mustard | cytosol | 30.21 | 44.85 |
| KRH03683 | Soybean | plastid | 40.28 | 44.44 |
| Os04t0496700-00 | Rice | nucleus | 31.6 | 44.17 |
| KRH09728 | Soybean | cytosol | 17.01 | 43.36 |
| PGSC0003DMT400079441 | Potato | plastid | 33.33 | 41.38 |
| Solyc07g008210.2.1 | Tomato | cytosol, nucleus, plastid | 32.99 | 41.3 |
| CDX92483 | Canola | plastid | 38.19 | 39.29 |
| CDY60380 | Canola | plastid | 36.46 | 39.18 |
| VIT_09s0002g06810.t01 | Wine grape | cytosol | 41.32 | 38.89 |
| CDY45101 | Canola | plastid | 38.19 | 38.87 |
| Bra002280.1-P | Field mustard | plastid | 38.19 | 38.73 |
| CDX88849 | Canola | plastid | 35.76 | 38.29 |
| AT4G32340.1 | Thale cress | mitochondrion | 31.6 | 38.24 |
| KRH23575 | Soybean | plastid | 34.03 | 38.13 |
| Bra006547.1-P | Field mustard | plastid | 36.11 | 38.1 |
| CDY35827 | Canola | plastid | 37.85 | 37.46 |
| AT5G20190.1 | Thale cress | plastid | 37.5 | 37.24 |
| PGSC0003DMT400073455 | Potato | plastid | 30.9 | 37.24 |
| Os07t0542800-00 | Rice | cytosol, mitochondrion, nucleus, plastid | 31.25 | 36.59 |
| PGSC0003DMT400001660 | Potato | mitochondrion, nucleus, plastid | 40.62 | 36.56 |
| VIT_11s0016g05430.t01 | Wine grape | plastid | 36.46 | 36.46 |
| Solyc06g068130.2.1 | Tomato | plastid | 30.21 | 36.25 |
| CDX75237 | Canola | plastid | 30.9 | 35.89 |
| CDX68837 | Canola | mitochondrion, plastid | 30.9 | 35.6 |
| Solyc03g116670.2.1 | Tomato | nucleus | 38.89 | 35.56 |
| Bra011339.1-P | Field mustard | plastid | 29.51 | 34.84 |
| CDY39992 | Canola | nucleus | 35.07 | 33.01 |
| CDX87295 | Canola | nucleus | 28.82 | 32.81 |
| AT1G80130.1 | Thale cress | nucleus | 34.72 | 32.79 |
| Bra035194.1-P | Field mustard | nucleus | 34.72 | 32.68 |
| HORVU5Hr1G031990.1 | Barley | nucleus | 13.19 | 32.2 |
| KRH47446 | Soybean | plastid | 35.07 | 32.06 |
| KRH44461 | Soybean | plastid | 35.07 | 32.06 |
| Bra008495.1-P | Field mustard | mitochondrion, nucleus | 31.25 | 29.8 |
| CDY37568 | Canola | nucleus | 30.9 | 28.34 |
| CDY41120 | Canola | mitochondrion | 29.86 | 28.01 |
| HORVU2Hr1G088520.1 | Barley | cytosol, nucleus, plastid | 26.74 | 25.84 |
| HORVU4Hr1G084230.1 | Barley | mitochondrion, plastid | 29.17 | 24.63 |
| HORVU1Hr1G050780.2 | Barley | plastid | 25.35 | 19.16 |
| HORVU1Hr1G073460.2 | Barley | plastid | 23.26 | 13.09 |
| HORVU3Hr1G084970.2 | Barley | plastid | 21.88 | 13.04 |
| HORVU1Hr1G045530.3 | Barley | cytosol | 10.07 | 10.25 |
| HORVU1Hr1G073400.1 | Barley | endoplasmic reticulum | 7.29 | 6.56 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G090280.1 | EnsemblPlantsGene:HORVU7Hr1G090280 | Gene3D:1.25.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR011990 | InterPro:TPR-like_helical_dom_sf | PANTHER:PTHR26312 | PANTHER:PTHR26312:SF75 | SEG:seg | SUPFAM:SSF48452 |
| UniParc:UPI000B4767FC | UniProt:A0A287X9P0 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chrchr7H:+:549643259..549644848
Molecular Weight (calculated)
29749.3 Da
IEP (calculated)
4.283
GRAVY (calculated)
-0.336
Length
288 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLRSASSPL LNAARVPTGE HVLGHGHLAV ASPAGHQGPR QQGALCRALS EADLLAPVQL PAARSSPASA FLEELGEEGA QEEDEDVVGV AALPLRRLLT
101: SAGLDAAVGR DDYEEEAGAG GALALLEGVG GGGGRGRVCG GWQGGRGGDG DGDGRERGAT DAHYRRMIRA NPGNSLPLGN YARFLKEVQG DAARAQEYCE
201: RAIVANPGDG DALAMYAGLV WETSRDAERA DAYYSCAVQA APDDCYVLGS YAGFLWDAEE EDDLNDGQPA ASPPFYGAAQ PSSIRAAS
101: SAGLDAAVGR DDYEEEAGAG GALALLEGVG GGGGRGRVCG GWQGGRGGDG DGDGRERGAT DAHYRRMIRA NPGNSLPLGN YARFLKEVQG DAARAQEYCE
201: RAIVANPGDG DALAMYAGLV WETSRDAERA DAYYSCAVQA APDDCYVLGS YAGFLWDAEE EDDLNDGQPA ASPPFYGAAQ PSSIRAAS
001: MLLRSASTPL LNSLVHVSSP RDSPIETVES VHQIQRHRSI TLSASSSSCC YSPMSVHSSD DSSRRMKRTA SDSDLRHLTS TKPPVSKFLS GGALMEDVDE
101: GIGFGLIRTS SYDGISWALD EDTEVAGGGG GGMFHGGGKG RSGGRSDGGD GGDDNTDVHY RKMIEANPGN GIFLSNYAKF LKEVRKDYLK AEEYCGRAIL
201: VSPNDGNVLA MYAELVWKIH KDSSRAENYF NQAVAAAPED CYVQASYARF LWDAEEEEEE EKEERHEEEL EHQTSRMNFF TGPSPITAMS
101: GIGFGLIRTS SYDGISWALD EDTEVAGGGG GGMFHGGGKG RSGGRSDGGD GGDDNTDVHY RKMIEANPGN GIFLSNYAKF LKEVRKDYLK AEEYCGRAIL
201: VSPNDGNVLA MYAELVWKIH KDSSRAENYF NQAVAAAPED CYVQASYARF LWDAEEEEEE EKEERHEEEL EHQTSRMNFF TGPSPITAMS
Arabidopsis Description
Tetratricopeptide repeat (TPR)-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4K464]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.