CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH20249	Soybean	plastid	91.95	93.39
GSMUA_Achr2P15930_001	Banana	cytosol	27.97	60.83
KRH09728	Soybean	cytosol	23.75	54.87
VIT_11s0016g05430.t01	Wine grape	plastid	55.56	50.35
Bra020090.1-P	Field mustard	cytosol	36.02	48.45
VIT_09s0002g06810.t01	Wine grape	cytosol	56.7	48.37
CDY60380	Canola	plastid	48.28	47.01
CDX88849	Canola	plastid	47.51	46.1
Bra006547.1-P	Field mustard	plastid	47.89	45.79
Bra002280.1-P	Field mustard	plastid	49.04	45.07
CDX92483	Canola	plastid	48.28	45.0
AT5G20190.1	Thale cress	plastid	49.81	44.83
CDY45101	Canola	plastid	47.89	44.17
CDY35827	Canola	plastid	48.28	43.3
PGSC0003DMT400079441	Potato	plastid	37.16	41.81
Solyc07g008210.2.1	Tomato	cytosol, nucleus, plastid	36.78	41.74
KRH23575	Soybean	plastid	41.0	41.63
TraesCS7D01G374500.1	Wheat	mitochondrion	44.44	40.99
TraesCS7A01G377700.1	Wheat	mitochondrion	44.83	40.77
HORVU7Hr1G090280.1	Barley	mitochondrion	44.44	40.28
TraesCS7B01G279400.1	Wheat	mitochondrion	44.83	39.93
Os06t0606700-00	Rice	plastid	42.53	39.93
Zm00001d046530_P001	Maize	plastid	45.21	39.73
KRH44461	Soybean	plastid	45.59	37.78
KRH47446	Soybean	plastid	44.06	36.51
EER88623	Sorghum	mitochondrion	43.3	35.31
KRH39558	Soybean	plastid	34.1	35.18
KRG95736	Soybean	cytosol, nucleus, plastid	26.82	32.86
KRH74400	Soybean	nucleus, plastid	34.48	30.93
Os04t0496700-00	Rice	nucleus	21.07	26.7
KRH67454	Soybean	nucleus	34.1	24.93
Os07t0542800-00	Rice	cytosol, mitochondrion, nucleus, plastid	20.31	21.54
KRH34549	Soybean	nucleus	23.75	15.86
KRG92250	Soybean	cytosol	22.61	15.25
KRH46437	Soybean	plastid	27.59	13.71
KRG98335	Soybean	plastid	26.82	13.16
KRH73162	Soybean	mitochondrion	21.46	11.62
KRH14978	Soybean	cytosol, plastid	19.92	10.9

Protein Annotations

EMBL:ACUP02010356	EnsemblPlants:KRH03683	EnsemblPlantsGene:GLYMA_17G113600	EntrezGene:100809777	Gene3D:1.25.40.10	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR011990	InterPro:IPR013026	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf
PANTHER:PTHR26312	PANTHER:PTHR26312:SF75	PFscan:PS50293	ProteinID:KRH03683	ProteinID:KRH03683.1	SEG:seg
SUPFAM:SSF48452	UniParc:UPI000233E20A	UniProt:I1MU80	MapMan:35.2	:	:

Description

hypothetical protein

Coordinates

chr17:-:8989211..8991547

Molecular Weight (calculated)

28224.2 Da

IEP (calculated)

4.255

GRAVY (calculated)

-0.538

Length

261 amino acids

Sequence
(BLAST)

001: MTTTTMLLRS SSTPILNSRI PHSNLNPKDS PHEPEILHRS PRTRSLTLSA SLSSLSPSRM TRALSETDLS ARSKTASFGS ALFSFYESDD GDVAVVEGGG
101: VGGGGGGWDN GDGGGSGFWD SNNGNDSTDL YYRTMIEANP GNPLFLGNYA RYLKEVRGDY VKAEEYCSRA ILANPNDGKV LSMYADLIWE SQKDASRAET
201: YFDQAVKAAP DDCYVLASYA HFLWDAEEEE DDEVQEDYSE ISPSFLHGAA PPPPPPLAAA S

Best Arabidopsis Sequence Match ( AT5G20190.1 )
(BLAST)

001: MLLRSASTPL LNSLVHVSSP RDSPIETVES VHQIQRHRSI TLSASSSSCC YSPMSVHSSD DSSRRMKRTA SDSDLRHLTS TKPPVSKFLS GGALMEDVDE
101: GIGFGLIRTS SYDGISWALD EDTEVAGGGG GGMFHGGGKG RSGGRSDGGD GGDDNTDVHY RKMIEANPGN GIFLSNYAKF LKEVRKDYLK AEEYCGRAIL
201: VSPNDGNVLA MYAELVWKIH KDSSRAENYF NQAVAAAPED CYVQASYARF LWDAEEEEEE EKEERHEEEL EHQTSRMNFF TGPSPITAMS

Arabidopsis Description

Tetratricopeptide repeat (TPR)-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4K464]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.