Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006547.1-P | Field mustard | plastid | 98.14 | 96.7 |
| CDY60380 | Canola | plastid | 92.57 | 92.91 |
| AT5G20190.1 | Thale cress | plastid | 85.13 | 78.97 |
| CDX92483 | Canola | plastid | 81.41 | 78.21 |
| CDY35827 | Canola | plastid | 83.27 | 76.98 |
| CDY45101 | Canola | plastid | 76.95 | 73.14 |
| GSMUA_Achr2P15930_001 | Banana | cytosol | 24.54 | 55.0 |
| KRH20249 | Soybean | plastid | 46.84 | 49.03 |
| KRH03683 | Soybean | plastid | 46.1 | 47.51 |
| VIT_11s0016g05430.t01 | Wine grape | plastid | 46.1 | 43.06 |
| VIT_09s0002g06810.t01 | Wine grape | cytosol | 44.98 | 39.54 |
| CDX87295 | Canola | nucleus | 33.83 | 35.97 |
| HORVU7Hr1G090280.1 | Barley | mitochondrion | 38.29 | 35.76 |
| TraesCS7D01G374500.1 | Wheat | mitochondrion | 37.55 | 35.69 |
| Os06t0606700-00 | Rice | plastid | 36.8 | 35.61 |
| TraesCS7A01G377700.1 | Wheat | mitochondrion | 37.92 | 35.54 |
| CDY39992 | Canola | nucleus | 40.15 | 35.29 |
| CDX75237 | Canola | plastid | 32.34 | 35.08 |
| PGSC0003DMT400079441 | Potato | plastid | 30.11 | 34.91 |
| CDX68837 | Canola | mitochondrion, plastid | 32.34 | 34.8 |
| Solyc07g008210.2.1 | Tomato | cytosol, nucleus, plastid | 29.74 | 34.78 |
| TraesCS7B01G279400.1 | Wheat | mitochondrion | 37.17 | 34.13 |
| CDX78813 | Canola | mitochondrion | 29.0 | 34.06 |
| CDY37568 | Canola | nucleus | 39.03 | 33.44 |
| Zm00001d046530_P001 | Maize | plastid | 36.8 | 33.33 |
| CDY41120 | Canola | mitochondrion | 37.92 | 33.22 |
| CDY44501 | Canola | mitochondrion | 28.62 | 31.69 |
| EER88623 | Sorghum | mitochondrion | 37.55 | 31.56 |
| CDY08881 | Canola | plastid | 29.74 | 30.77 |
| CDX76550 | Canola | plastid | 29.37 | 30.04 |
| CDY02002 | Canola | cytosol, mitochondrion, nucleus | 15.61 | 27.63 |
| CDY18241 | Canola | nucleus | 24.54 | 22.76 |
| CDX89816 | Canola | nucleus | 24.16 | 22.34 |
| Os04t0496700-00 | Rice | nucleus | 17.1 | 22.33 |
| Os07t0542800-00 | Rice | cytosol, mitochondrion, nucleus, plastid | 18.96 | 20.73 |
| CDY59180 | Canola | cytosol | 13.38 | 20.34 |
| CDY51354 | Canola | plastid | 25.65 | 14.32 |
| CDX97868 | Canola | plastid | 26.02 | 13.94 |
| CDY09927 | Canola | plastid | 21.56 | 11.72 |
| CDY06247 | Canola | plastid | 21.56 | 11.72 |
| CDY10264 | Canola | plastid | 22.3 | 11.61 |
| CDY06694 | Canola | plastid | 21.93 | 11.48 |
| CDX99068 | Canola | plastid | 18.59 | 10.92 |
| CDX86126 | Canola | plastid | 18.96 | 10.49 |
| CDY38075 | Canola | plastid | 14.87 | 9.43 |
| CDY58299 | Canola | plastid | 16.73 | 9.28 |
Protein Annotations
| EnsemblPlants:CDX88849 | EnsemblPlantsGene:GSBRNA2T00148927001 | Gene3D:1.25.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR011990 | InterPro:TPR-like_helical_dom_sf | PANTHER:PTHR26312 | PANTHER:PTHR26312:SF75 | ProteinID:CDX88849 | ProteinID:CDX88849.1 |
| SEG:seg | SUPFAM:SSF48452 | UniParc:UPI0004EF1960 | MapMan:35.2 | : | : |
Description
BnaA03g08000D
Coordinates
chrLK031856:-:1285480..1286697
Molecular Weight (calculated)
29440.2 Da
IEP (calculated)
4.865
GRAVY (calculated)
-0.496
Length
269 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLRSASTPL LTSLVHVSSP RESPIETESL HQIQRPRSIT LSSSSSCCYS PMSLHSSDES SRRIKRTASE SDLKHLTSTK HASKFLAGAL MEDVEEGIGF
101: GIIRGSSYET EVGGGGGGGG GKRRSGGRSD GGDDGEDCTD VHYREMIEAN PGNGIFLSNY AKFLKEVRGD YLKAEEYCGR AVLVSPYDGN VLAMYAELVW
201: MIHKDSSRAE SYFNRAVAAA PDDCYVQASY ARFLWDAEDD EDERHGEVLE AQTSRMDFFT GPYPITAMS
101: GIIRGSSYET EVGGGGGGGG GKRRSGGRSD GGDDGEDCTD VHYREMIEAN PGNGIFLSNY AKFLKEVRGD YLKAEEYCGR AVLVSPYDGN VLAMYAELVW
201: MIHKDSSRAE SYFNRAVAAA PDDCYVQASY ARFLWDAEDD EDERHGEVLE AQTSRMDFFT GPYPITAMS
001: MLLRSASTPL LNSLVHVSSP RDSPIETVES VHQIQRHRSI TLSASSSSCC YSPMSVHSSD DSSRRMKRTA SDSDLRHLTS TKPPVSKFLS GGALMEDVDE
101: GIGFGLIRTS SYDGISWALD EDTEVAGGGG GGMFHGGGKG RSGGRSDGGD GGDDNTDVHY RKMIEANPGN GIFLSNYAKF LKEVRKDYLK AEEYCGRAIL
201: VSPNDGNVLA MYAELVWKIH KDSSRAENYF NQAVAAAPED CYVQASYARF LWDAEEEEEE EKEERHEEEL EHQTSRMNFF TGPSPITAMS
101: GIGFGLIRTS SYDGISWALD EDTEVAGGGG GGMFHGGGKG RSGGRSDGGD GGDDNTDVHY RKMIEANPGN GIFLSNYAKF LKEVRKDYLK AEEYCGRAIL
201: VSPNDGNVLA MYAELVWKIH KDSSRAENYF NQAVAAAPED CYVQASYARF LWDAEEEEEE EKEERHEEEL EHQTSRMNFF TGPSPITAMS
Arabidopsis Description
Tetratricopeptide repeat (TPR)-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4K464]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.