CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 4
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	plastid
Plant-mPloc:	nucleus
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH39558	Soybean	plastid	76.63	88.14
VIT_02s0012g01590.t01	Wine grape	nucleus	37.8	51.16
Bra013269.1-P	Field mustard	mitochondrion	39.52	50.22
CDX78813	Canola	mitochondrion	38.83	49.34
CDY44501	Canola	mitochondrion	37.46	44.86
PGSC0003DMT400045174	Potato	plastid	45.7	44.04
Solyc08g076730.2.1	Tomato	plastid	45.36	43.71
CDY08881	Canola	plastid	37.8	42.31
AT4G17940.1	Thale cress	mitochondrion	39.52	41.97
GSMUA_Achr4P27320_001	Banana	plastid	37.8	41.51
CDX76550	Canola	plastid	37.11	41.06
Bra021028.1-P	Field mustard	plastid	36.77	40.68
GSMUA_Achr5P03500_001	Banana	plastid	34.71	40.56
Os10t0576600-01	Rice	plastid	31.27	40.09
KRH09728	Soybean	cytosol	15.12	38.94
TraesCS1A01G194200.1	Wheat	plastid	30.58	37.71
TraesCS1B01G209200.1	Wheat	plastid	29.9	36.71
KRH20249	Soybean	plastid	30.58	34.63
KRH03683	Soybean	plastid	30.93	34.48
EER91874	Sorghum	plastid	28.87	32.56
Zm00001d030086_P001	Maize	plastid	27.84	32.53
KRH23575	Soybean	plastid	25.77	29.18
KRG95736	Soybean	cytosol, nucleus, plastid	20.96	28.64
KRH44461	Soybean	plastid	28.52	26.35
KRH47446	Soybean	plastid	27.15	25.08
KRH67454	Soybean	nucleus	27.49	22.41
HORVU1Hr1G050780.2	Barley	plastid	29.21	22.31
KRH34549	Soybean	nucleus	17.18	12.79
KRG92250	Soybean	cytosol	16.49	12.4
KRG98335	Soybean	plastid	21.31	11.65
KRH46437	Soybean	plastid	20.27	11.24
KRH73162	Soybean	mitochondrion	16.84	10.17
KRH14978	Soybean	cytosol, plastid	16.15	9.85

Protein Annotations

EMBL:ACUP02000021	EnsemblPlants:KRH74400	EnsemblPlantsGene:GLYMA_01G017000	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR011990	InterPro:IPR013026	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR26312
PANTHER:PTHR26312:SF53	PFscan:PS50293	ProteinID:KRH74400	ProteinID:KRH74400.1	SEG:seg	SUPFAM:SSF48452
UniParc:UPI0002955188	UniProt:K7K1A3	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:1622886..1624365

Molecular Weight (calculated)

32386.7 Da

IEP (calculated)

5.570

GRAVY (calculated)

-0.659

Length

291 amino acids

Sequence
(BLAST)

001: MTINHPMHKG CSLNTFIEVR GDRSFPHSNL KSLIKKTMQA SLIRTGSVPV QNTVLPGSPR VSLTRQASFS GDKSHAHSPR FSIHSSHSNN RRSSSERDDE
101: NFGVRRDLNR TGSPSFSPIV PHEEDFLSDA APRKLGIRPE DLQFGEGDGG FHRGAPITGG NGGERMKIGA YYEEMLRSNP TDALLLRNYG KFLHEVEKDT
201: VRAEEFYGRA ILANPGDGEL LSLYGTLIWE TQRDEDRAKS YFDQAIHAAP NDCTVLGSYA HFMWEAEEEE EEEEVNGGAT EITATEMIVA F

Best Arabidopsis Sequence Match ( AT4G17940.1 )
(BLAST)

001: MKSLLMRTGS MPVLQNRLIS GGSSRKMTPI SRTNSVESLS SYGERFAGGK ISIEVKANVG MRRVLSESDV IRSERMLKRV GSKPSPARIP EDDEAGEEEI
101: RFADGWGSMI SGGLPVEEKC FTGGGVGGGS GYSGGYGNGG GGGYEDKSKI GDYYREMLRS NPNNSLLLMN YGKFLYEVEK DAEGAEEYYG RAILENPGDG
201: EALSMYGRLI WETKRDEKRA QGYFDQAVNA SPNDCMVLGS YARFMWEAED DDDDDEEEEE EEWMAASPLM VSAV

Arabidopsis Description

Tetratricopeptide repeat (TPR)-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WUZ1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.