CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
mitochondrion 3
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH73162	Soybean	mitochondrion	91.61	90.66
VIT_13s0067g00240.t01	Wine grape	cytosol	36.48	43.61
Os08t0382600-00	Rice	mitochondrion	13.63	37.14
PGSC0003DMT400069757	Potato	plastid	33.75	36.02
KRH46437	Soybean	plastid	38.57	35.05
Solyc05g052700.2.1	Tomato	extracellular	33.12	35.03
KRG98335	Soybean	plastid	38.57	34.59
HORVU1Hr1G073400.1	Barley	endoplasmic reticulum	15.09	22.5
KRH09728	Soybean	cytosol	5.24	22.12
KRH03683	Soybean	plastid	10.9	19.92
KRH20249	Soybean	plastid	10.48	19.46
KRH23575	Soybean	plastid	10.48	19.46
KRH39558	Soybean	plastid	10.27	19.37
KRG95736	Soybean	cytosol, nucleus, plastid	8.39	18.78
KRH44461	Soybean	plastid	11.74	17.78
KRH47446	Soybean	plastid	11.11	16.83
KRH74400	Soybean	nucleus, plastid	9.85	16.15
KRH67454	Soybean	nucleus	11.95	15.97
KRG92250	Soybean	cytosol	9.22	11.37
KRH34549	Soybean	nucleus	9.22	11.25

Protein Annotations

EMBL:ACUP02008548	EnsemblPlants:KRH14978	EnsemblPlantsGene:GLYMA_14G061300	EntrezGene:100781766	Gene3D:1.25.40.10	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:IPR011990
InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR26312	PANTHER:PTHR26312:SF87	ProteinID:KRH14978	ProteinID:KRH14978.1	SEG:seg
SUPFAM:SSF48452	TMHMM:TMhelix	UniParc:UPI00023D4005	UniProt:K7M568	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr14:+:4961306..4963911

Molecular Weight (calculated)

54943.5 Da

IEP (calculated)

5.279

GRAVY (calculated)

-0.401

Length

477 amino acids

Sequence
(BLAST)

001: MASRVSPNLK CWQFRTPYYC DSWKTPRAVP SSILRHVTER NNVMPPCGLV HRSRNLRVQR GKRVYSSLFD DFHQEERMNL VQDGCWDENG HEIACAVSDN
101: TPNKELKNDF SGGGCSSEEF GTMKPEVLEP SLLGIQPEPP SWPERDEILR RTFERKVNSV GISLSIRMIK KKLQLEEGSK EAGELTELTN CSVKKTFSSM
201: MLIMHELQSH ALQTRESLCG ENLQGVMTKL EREMDASFVW LFQQVFWKTP ALMVYVMVLL ANFLVFSMND NTVKVITPSS MITKALTLTS NESKVQHSHV
301: DVDQGEYVNR ELTEEEHMLW NSFLEEASML QKELSGEVLD HETRQRLVAP VSVELEGDQY EEYVKTELYY KKHLFRTPHC SLLLSNYAQF LFLVLHDIDG
401: AEEYYKKSVL AESSEAEAFS RYADFLLMVR KDVWAAELRY LQTLEADPGN AYYLSKYASF LWNTGGQDTN SFPMMVI

Best Arabidopsis Sequence Match ( AT3G47080.1 )
(BLAST)

001: MEVKVATTTS FHWSGRHTAI PQCPSFSQTL TSSKRRRSRG IAGDVSVGGG SLRLKPSTFL GTQSGKLHRS KSCELWQFSN STTKKIRTDV KKKHNPLRRV
101: CSASSGFFSS DEAFSVKMQE LASQFRNAGD EEEEENKQKS EAVDNDNDSN NHRFGSLKLL QESVPGLASL EAPWAEMVNH SSIERKANSV DLPLSLRIIK
201: RKLQEEALKK ASATTYCSIN RAFSSMVFMI EELHSFALQT RVGVLKQVKK EMHASLLWIF QRVFSQTPTL MVYVMILLAN YTVHSVASNL PIAASPPVVN
301: KGPDQTQQRI DFSSLKESTK LDGSKWLGSI NFDKVSHLPR HRDSVSGEGM REEEVSLWNS MVEEADQMQD SSVDRDMRLR LVSPITARIE LDDYANYTRT
401: ELLYKIGLAQ EPDNHLLLAN YAQFLYLVTQ DHERAENCFK KAIESEDVDA ETYSKYAIFL WKVRNDLWAA EENFLEAISA DPTNSFYAAN YANFLWNTGG
501: EETCFPLEDS TQEMV

Arabidopsis Description

Tetratricopeptide repeat (TPR)-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SD65]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.