Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 3
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os08t0382600-00 | Rice | mitochondrion | 22.5 | 41.14 |
| HORVU1Hr1G073460.2 | Barley | plastid | 65.31 | 40.82 |
| HORVU3Hr1G084970.2 | Barley | plastid | 41.56 | 27.54 |
| VIT_13s0067g00240.t01 | Wine grape | cytosol | 25.62 | 20.55 |
| KRH73162 | Soybean | mitochondrion | 22.81 | 15.15 |
| KRH14978 | Soybean | cytosol, plastid | 22.5 | 15.09 |
| PGSC0003DMT400069757 | Potato | plastid | 18.75 | 13.42 |
| Solyc05g052700.2.1 | Tomato | extracellular | 17.81 | 12.64 |
| HORVU7Hr1G090280.1 | Barley | mitochondrion | 6.56 | 7.29 |
| HORVU1Hr1G045530.3 | Barley | cytosol | 4.38 | 4.95 |
| HORVU4Hr1G084230.1 | Barley | mitochondrion, plastid | 3.75 | 3.52 |
| HORVU2Hr1G088520.1 | Barley | cytosol, nucleus, plastid | 3.12 | 3.36 |
| HORVU1Hr1G050780.2 | Barley | plastid | 3.44 | 2.89 |
| HORVU5Hr1G031990.1 | Barley | nucleus | 0.62 | 1.69 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G073400.1 | EnsemblPlantsGene:HORVU1Hr1G073400 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | ncoils:Coil |
| PANTHER:PTHR26312 | PANTHER:PTHR26312:SF83 | SEG:seg | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000B481FCD |
| UniProt:A0A287G7N9 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr1H:+:503256232..503257711
Molecular Weight (calculated)
23814.4 Da
IEP (calculated)
4.435
GRAVY (calculated)
0.150
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: ETDTLLIVKN VMLLILKLXX XXXXXXXXXX XXXXXXLGSA GESVGRAFSS MVLIVQELQS FALQQMQEAL LCDDLQGVLA RAHGEMHASF VWLFQHIFAA
101: TPALMLSLML LLANFSVHSM SHSVAAAAVS PTLPAAAAXX XXXXXXXXXX XXXXXAVSVK TFSSGRTASV GGGSGGGGDV RPVAGASSDD RWDESRYSLN
201: RVAPQQLAPL XXXXXXXXXX XXXXXXXXXX XXXXXMQADA RADELTDPSV LGSLVAPVEA EIETEDVGEY ARTEQGYELA XXXXXXXXXX XXXXXXXXXX
301: XXXXXXXXXX XXXXGWRTSP
101: TPALMLSLML LLANFSVHSM SHSVAAAAVS PTLPAAAAXX XXXXXXXXXX XXXXXAVSVK TFSSGRTASV GGGSGGGGDV RPVAGASSDD RWDESRYSLN
201: RVAPQQLAPL XXXXXXXXXX XXXXXXXXXX XXXXXMQADA RADELTDPSV LGSLVAPVEA EIETEDVGEY ARTEQGYELA XXXXXXXXXX XXXXXXXXXX
301: XXXXXXXXXX XXXXGWRTSP
001: MGVKVATSST FHQWVAHPIV HHSSSLSQTL ASSAVSSPSR RRIIGNDGRS SLSCRSVMQS QRLNPSSPFG TSSTNLRHSK SCELWESTKR PKTQLIRRAF
101: SANVDPFSEE EFAKKMQELT LKFQVSNEEE DNESDTRIDD YTRKMDIVGS HNNFRSDSME PPWPEMVQMS NIERKANSVD LPLSLRIIKR KLQMEEGVLN
201: QVGESACCSV KKAFSSMVFM IRELQSFTLH MRELLLFEDL QGILHRVRKE MQASFVWLFQ QVFSATPTLM VSVMILLANF TVYSIESNSA LAAAVSPPTT
301: LSFSFETTAE ISETQETNQK FDSSMVKTFS VSSPYGKTSF VGGGGGNNIP PPVQSGTDGD GSDQFRKSQF SSSSLGATSA DSDVSVSGQE EIRLWNSILE
401: ETAKMETLDH ETMKGMVSPV EARLEAEESM DYFKTELLYQ TGLSQEPGNV LLLANYAQFL YLIIHDYDRL ESCKLILTVR SSRGMVDILL QIREP
101: SANVDPFSEE EFAKKMQELT LKFQVSNEEE DNESDTRIDD YTRKMDIVGS HNNFRSDSME PPWPEMVQMS NIERKANSVD LPLSLRIIKR KLQMEEGVLN
201: QVGESACCSV KKAFSSMVFM IRELQSFTLH MRELLLFEDL QGILHRVRKE MQASFVWLFQ QVFSATPTLM VSVMILLANF TVYSIESNSA LAAAVSPPTT
301: LSFSFETTAE ISETQETNQK FDSSMVKTFS VSSPYGKTSF VGGGGGNNIP PPVQSGTDGD GSDQFRKSQF SSSSLGATSA DSDVSVSGQE EIRLWNSILE
401: ETAKMETLDH ETMKGMVSPV EARLEAEESM DYFKTELLYQ TGLSQEPGNV LLLANYAQFL YLIIHDYDRL ESCKLILTVR SSRGMVDILL QIREP
Arabidopsis Description
At1g07280/F22G5_32 [Source:UniProtKB/TrEMBL;Acc:Q8VZC8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.