CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P15930_001	Banana	cytosol	47.79	45.0
KRH23575	Soybean	plastid	90.27	39.69
KRH47446	Soybean	plastid	68.14	24.44
KRH03683	Soybean	plastid	54.87	23.75
KRH20249	Soybean	plastid	53.1	23.35
KRH44461	Soybean	plastid	62.83	22.54
PGSC0003DMT400073455	Potato	plastid	46.9	22.18
Solyc06g068130.2.1	Tomato	plastid	46.02	21.67
Os06t0606700-00	Rice	plastid	48.67	19.78
Zm00001d046530_P001	Maize	plastid	51.33	19.53
Solyc03g116670.2.1	Tomato	nucleus	50.44	18.1
EER88623	Sorghum	mitochondrion	50.44	17.81
PGSC0003DMT400001660	Potato	mitochondrion, nucleus, plastid	49.56	17.5
KRH39558	Soybean	plastid	38.94	17.39
AT1G80130.1	Thale cress	nucleus	46.9	17.38
TraesCS7D01G374500.1	Wheat	mitochondrion	43.36	17.31
HORVU7Hr1G090280.1	Barley	mitochondrion	43.36	17.01
KRG95736	Soybean	cytosol, nucleus, plastid	31.86	16.9
Bra008495.1-P	Field mustard	mitochondrion, nucleus	45.13	16.89
TraesCS7A01G377700.1	Wheat	mitochondrion	42.48	16.72
TraesCS7B01G279400.1	Wheat	mitochondrion	43.36	16.72
CDY41120	Canola	mitochondrion	44.25	16.29
CDY37568	Canola	nucleus	45.13	16.24
CDY39992	Canola	nucleus	43.36	16.01
Bra035194.1-P	Field mustard	nucleus	41.59	15.36
KRH74400	Soybean	nucleus, plastid	38.94	15.12
CDX87295	Canola	nucleus	29.2	13.04
Os04t0496700-00	Rice	nucleus	21.24	11.65
KRH67454	Soybean	nucleus	33.63	10.64
Os07t0542800-00	Rice	cytosol, mitochondrion, nucleus, plastid	22.12	10.16
KRH34549	Soybean	nucleus	32.74	9.46
KRG92250	Soybean	cytosol	31.86	9.3
KRH73162	Soybean	mitochondrion	23.89	5.6
KRH14978	Soybean	cytosol, plastid	22.12	5.24
KRH46437	Soybean	plastid	23.01	4.95
KRG98335	Soybean	plastid	23.01	4.89

Protein Annotations

EMBL:ACUP02009108	EnsemblPlants:KRH09728	EnsemblPlantsGene:GLYMA_15G0079002	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR011990	InterPro:IPR013026	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR26312
PANTHER:PTHR26312:SF75	PFAM:PF14559	PFscan:PS50293	ProteinID:KRH09728	ProteinID:KRH09728.1	SUPFAM:SSF48452
UniParc:UPI0006ED6AC4	UniProt:A0A0R0FU25	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr15:-:648381..649630

Molecular Weight (calculated)

12999.7 Da

IEP (calculated)

4.180

GRAVY (calculated)

-0.837

Length

113 amino acids

Sequence
(BLAST)

001: VRGDYPKAEE YLERAILANP GDANVLSLYA DLIWQTEKNA DRAEGYFDQA VKTAPDDCYV LASYAKFLWD VEEDEDKDCQ HKTDHGHAYP PDLFQETEDR
101: PHVTAVFQSY HSE

Best Arabidopsis Sequence Match ( AT5G20190.1 )
(BLAST)

001: MLLRSASTPL LNSLVHVSSP RDSPIETVES VHQIQRHRSI TLSASSSSCC YSPMSVHSSD DSSRRMKRTA SDSDLRHLTS TKPPVSKFLS GGALMEDVDE
101: GIGFGLIRTS SYDGISWALD EDTEVAGGGG GGMFHGGGKG RSGGRSDGGD GGDDNTDVHY RKMIEANPGN GIFLSNYAKF LKEVRKDYLK AEEYCGRAIL
201: VSPNDGNVLA MYAELVWKIH KDSSRAENYF NQAVAAAPED CYVQASYARF LWDAEEEEEE EKEERHEEEL EHQTSRMNFF TGPSPITAMS

Arabidopsis Description

Tetratricopeptide repeat (TPR)-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4K464]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.