Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH47446 | Soybean | plastid | 87.3 | 87.3 |
| KRH09728 | Soybean | cytosol | 22.54 | 62.83 |
| KRH23575 | Soybean | plastid | 48.25 | 59.14 |
| GSMUA_Achr2P15930_001 | Banana | cytosol | 19.37 | 50.83 |
| KRH03683 | Soybean | plastid | 37.78 | 45.59 |
| KRH20249 | Soybean | plastid | 36.19 | 44.36 |
| PGSC0003DMT400073455 | Potato | plastid | 29.84 | 39.33 |
| AT1G80130.1 | Thale cress | nucleus | 37.46 | 38.69 |
| CDX87295 | Canola | nucleus | 30.79 | 38.34 |
| Solyc06g068130.2.1 | Tomato | plastid | 29.21 | 38.33 |
| CDY41120 | Canola | mitochondrion | 37.14 | 38.11 |
| PGSC0003DMT400001660 | Potato | mitochondrion, nucleus, plastid | 38.41 | 37.81 |
| Solyc03g116670.2.1 | Tomato | nucleus | 37.78 | 37.78 |
| Bra008495.1-P | Field mustard | mitochondrion, nucleus | 36.19 | 37.75 |
| CDY39992 | Canola | nucleus | 36.19 | 37.25 |
| Bra035194.1-P | Field mustard | nucleus | 35.87 | 36.93 |
| Os06t0606700-00 | Rice | plastid | 32.38 | 36.69 |
| CDY37568 | Canola | nucleus | 36.19 | 36.31 |
| Zm00001d046530_P001 | Maize | plastid | 33.65 | 35.69 |
| TraesCS7D01G374500.1 | Wheat | mitochondrion | 32.06 | 35.69 |
| TraesCS7B01G279400.1 | Wheat | mitochondrion | 32.7 | 35.15 |
| HORVU7Hr1G090280.1 | Barley | mitochondrion | 32.06 | 35.07 |
| TraesCS7A01G377700.1 | Wheat | mitochondrion | 31.75 | 34.84 |
| KRH39558 | Soybean | plastid | 26.67 | 33.2 |
| EER88623 | Sorghum | mitochondrion | 33.02 | 32.5 |
| KRG95736 | Soybean | cytosol, nucleus, plastid | 21.59 | 31.92 |
| Os04t0496700-00 | Rice | nucleus | 18.73 | 28.64 |
| KRH74400 | Soybean | nucleus, plastid | 26.35 | 28.52 |
| KRH67454 | Soybean | nucleus | 27.94 | 24.65 |
| Os07t0542800-00 | Rice | cytosol, mitochondrion, nucleus, plastid | 18.1 | 23.17 |
| KRG92250 | Soybean | cytosol | 18.73 | 15.25 |
| KRH34549 | Soybean | nucleus | 18.41 | 14.83 |
| KRH46437 | Soybean | plastid | 23.17 | 13.9 |
| KRG98335 | Soybean | plastid | 22.54 | 13.35 |
| KRH73162 | Soybean | mitochondrion | 19.05 | 12.45 |
| KRH14978 | Soybean | cytosol, plastid | 17.78 | 11.74 |
Protein Annotations
| EMBL:ACUP02004928 | EnsemblPlants:KRH44461 | EnsemblPlantsGene:GLYMA_08G212300 | EntrezGene:100788011 | Gene3D:1.25.40.10 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf |
| PANTHER:PTHR26312 | PANTHER:PTHR26312:SF75 | PFscan:PS50293 | ProteinID:KRH44461 | ProteinID:KRH44461.1 | SEG:seg |
| SUPFAM:SSF48452 | UniParc:UPI0002338F7D | UniProt:I1KVE9 | MapMan:35.2 | : | : |
Description
hypothetical protein
Coordinates
chr8:+:17128621..17130982
Molecular Weight (calculated)
35006.8 Da
IEP (calculated)
6.448
GRAVY (calculated)
-0.771
Length
315 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLRSSSAPI LTSLLHYSKE SSSEPEHILN LPKTASALSL SQNLVEIDLK KSSSPKRKNR VPLSSVPKNQ QSKKIKERDE GKDPQQKTCM KAKSSIQELF
101: SSLDLDKGLL DHEERGSGKK DSWLQTSVMG GGMGSDGGWI CGGCNGSGRG SGGGHGKRWG FHEGNDHGRD RTEAYYQNMI EANPSDALLL GNYAKFLKEV
201: CDDYPKSKEY LERAILANPD DGHILSLYAE LIWQLEKDAN RAEGYFDQAI KSAPYDSYVL ASYANFLWDA EEDEEDKDCK NKSNHSHTYP TDLFHGANHH
301: IHLTAAIETS PLFLK
101: SSLDLDKGLL DHEERGSGKK DSWLQTSVMG GGMGSDGGWI CGGCNGSGRG SGGGHGKRWG FHEGNDHGRD RTEAYYQNMI EANPSDALLL GNYAKFLKEV
201: CDDYPKSKEY LERAILANPD DGHILSLYAE LIWQLEKDAN RAEGYFDQAI KSAPYDSYVL ASYANFLWDA EEDEEDKDCK NKSNHSHTYP TDLFHGANHH
301: IHLTAAIETS PLFLK
001: MLLRSASTPL LNSLVHVSSP RDSPIETVES VHQIQRHRSI TLSASSSSCC YSPMSVHSSD DSSRRMKRTA SDSDLRHLTS TKPPVSKFLS GGALMEDVDE
101: GIGFGLIRTS SYDGISWALD EDTEVAGGGG GGMFHGGGKG RSGGRSDGGD GGDDNTDVHY RKMIEANPGN GIFLSNYAKF LKEVRKDYLK AEEYCGRAIL
201: VSPNDGNVLA MYAELVWKIH KDSSRAENYF NQAVAAAPED CYVQASYARF LWDAEEEEEE EKEERHEEEL EHQTSRMNFF TGPSPITAMS
101: GIGFGLIRTS SYDGISWALD EDTEVAGGGG GGMFHGGGKG RSGGRSDGGD GGDDNTDVHY RKMIEANPGN GIFLSNYAKF LKEVRKDYLK AEEYCGRAIL
201: VSPNDGNVLA MYAELVWKIH KDSSRAENYF NQAVAAAPED CYVQASYARF LWDAEEEEEE EKEERHEEEL EHQTSRMNFF TGPSPITAMS
Arabidopsis Description
Tetratricopeptide repeat (TPR)-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4K464]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.