CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 3
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	plastid
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH44461	Soybean	plastid	87.3	87.3
KRH09728	Soybean	cytosol	24.44	68.14
KRH23575	Soybean	plastid	49.21	60.31
GSMUA_Achr2P15930_001	Banana	cytosol	18.41	48.33
KRH03683	Soybean	plastid	36.51	44.06
KRH20249	Soybean	plastid	35.56	43.58
PGSC0003DMT400073455	Potato	plastid	29.21	38.49
CDY41120	Canola	mitochondrion	37.46	38.44
CDX87295	Canola	nucleus	30.79	38.34
Solyc06g068130.2.1	Tomato	plastid	28.89	37.92
Bra008495.1-P	Field mustard	mitochondrion, nucleus	36.19	37.75
CDY39992	Canola	nucleus	36.51	37.58
Os06t0606700-00	Rice	plastid	33.02	37.41
AT1G80130.1	Thale cress	nucleus	36.19	37.38
CDY37568	Canola	nucleus	36.83	36.94
Bra035194.1-P	Field mustard	nucleus	35.87	36.93
PGSC0003DMT400001660	Potato	mitochondrion, nucleus, plastid	36.51	35.94
Solyc03g116670.2.1	Tomato	nucleus	35.87	35.87
TraesCS7D01G374500.1	Wheat	mitochondrion	32.06	35.69
TraesCS7B01G279400.1	Wheat	mitochondrion	33.02	35.49
HORVU7Hr1G090280.1	Barley	mitochondrion	32.06	35.07
TraesCS7A01G377700.1	Wheat	mitochondrion	31.75	34.84
Zm00001d046530_P001	Maize	plastid	32.38	34.34
EER88623	Sorghum	mitochondrion	33.02	32.5
KRH39558	Soybean	plastid	24.44	30.43
KRG95736	Soybean	cytosol, nucleus, plastid	20.0	29.58
Os04t0496700-00	Rice	nucleus	18.73	28.64
KRH74400	Soybean	nucleus, plastid	25.08	27.15
Os07t0542800-00	Rice	cytosol, mitochondrion, nucleus, plastid	18.73	23.98
KRH67454	Soybean	nucleus	26.03	22.97
KRG92250	Soybean	cytosol	18.1	14.73
KRH34549	Soybean	nucleus	18.1	14.58
KRH46437	Soybean	plastid	21.9	13.14
KRG98335	Soybean	plastid	20.95	12.41
KRH73162	Soybean	mitochondrion	18.41	12.03
KRH14978	Soybean	cytosol, plastid	16.83	11.11

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:100784802	MapMan:35.2	EMBL:ACUP02004151	EnsemblPlantsGene:GLYMA_07G030500	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR011990	InterPro:IPR013026	UniProt:K7KZD4	EnsemblPlants:KRH47446
ProteinID:KRH47446	ProteinID:KRH47446.1	ProteinID:KRH47447.1	PFAM:PF14559	PFscan:PS50293	PANTHER:PTHR26312
PANTHER:PTHR26312:SF75	SUPFAM:SSF48452	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	UniParc:UPI00023391C9	SEG:seg

Description

hypothetical protein

Coordinates

chr7:-:2428922..2431246

Molecular Weight (calculated)

35122.8 Da

IEP (calculated)

4.922

GRAVY (calculated)

-0.659

Length

315 amino acids

Sequence
(BLAST)

001: MLLRSSSAPI LTSLLFYSKE FPSEPEHILH LPKTASALSL SQSLVDIDLK NSSSPRRKNR VPLSNVPNNQ QSIKINERYE GKDPQQKTFM KAKPSILELF
101: SSFDLDKGVL DHEECGAGKK DSWLQTSVMG AGMGSDGGWI CGGCNGSGRG SDGGHGRRWG FDEGNDHGRD RTDAYYQNMI EANPSDALLL GNYAKFLKEV
201: CEDYPKAKEY LERAILANPD DGHILSLYAE LIWQTEKDAD QAEGYFDQAI KSAPDDSYVL ASYANFLWDV EEDDEDKDCK NKSDHSHTYP TDLFHGTNHH
301: LHSTVAIEAL PLFLK

Best Arabidopsis Sequence Match ( AT5G20190.1 )
(BLAST)

001: MLLRSASTPL LNSLVHVSSP RDSPIETVES VHQIQRHRSI TLSASSSSCC YSPMSVHSSD DSSRRMKRTA SDSDLRHLTS TKPPVSKFLS GGALMEDVDE
101: GIGFGLIRTS SYDGISWALD EDTEVAGGGG GGMFHGGGKG RSGGRSDGGD GGDDNTDVHY RKMIEANPGN GIFLSNYAKF LKEVRKDYLK AEEYCGRAIL
201: VSPNDGNVLA MYAELVWKIH KDSSRAENYF NQAVAAAPED CYVQASYARF LWDAEEEEEE EKEERHEEEL EHQTSRMNFF TGPSPITAMS

Arabidopsis Description

Tetratricopeptide repeat (TPR)-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4K464]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.