Factsheet for Zm00001d032535_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	extracellular
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d013919_P001	Maize	plastid	85.99	84.57
EER93981	Sorghum	plastid	86.55	83.51
TraesCS1A01G172600.1	Wheat	plastid	60.5	62.79
TraesCS1D01G166000.1	Wheat	plastid	59.66	61.92
TraesCS1B01G191700.1	Wheat	plastid	59.38	61.45
Os10t0501900-01	Rice	plastid	61.62	60.61
HORVU1Hr1G045530.3	Barley	cytosol	26.05	32.86
Zm00001d012325_P001	Maize	plastid	26.89	18.6
Zm00001d046530_P001	Maize	plastid	15.41	18.52
Zm00001d030086_P001	Maize	plastid	12.89	18.47
Zm00001d003035_P001	Maize	plastid	14.29	18.35
Zm00001d038274_P002	Maize	plastid	25.49	18.13
Zm00001d042812_P001	Maize	plastid	26.33	17.97
Zm00001d027613_P002	Maize	plastid	17.37	17.42
Zm00001d010075_P001	Maize	plastid	25.49	17.33

Protein Annotations

EnsemblPlants:Zm00001d032535_P002	EnsemblPlants:Zm00001d032535_T002	EnsemblPlantsGene:Zm00001d032535	EntrezGene:103643390	Gene3D:1.25.40.10	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR011990	InterPro:IPR013026	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf
PANTHER:PTHR26312	PANTHER:PTHR26312:SF77	PFscan:PS50293	ProteinID:ONM05296.1	SEG:seg	SUPFAM:SSF48452
UniParc:UPI000221AD05	UniProt:A0A1D6KRF0	MapMan:35.2	:	:	:

Description

Tetratricopeptide repeat (TPR)-like superfamily protein

Coordinates

chr1:-:229847666..229849389

Molecular Weight (calculated)

37196.6 Da

IEP (calculated)

4.677

GRAVY (calculated)

-0.257

Length

357 amino acids

Sequence
(BLAST)

001: MTPASVVAAP RSVGALPLAA FPAPARAGVR RNGRSSRPAA CGGDDQQPPS MAAMPASLRA IQARRKQEAA QRGVPRATAT SAAGCAVAAL VKAVEAVQGA
101: AAGGAAEAAR GAGDAVAWVF SKVHLQSPDL AVGLLGMVAC CLGTIVEAER CRVEARKPEA APAGNAGADR PDGNGAPAEE PEDHDMPQLV EADVEKALWA
201: QIGILHGGGG LFGDSSYGAQ EELDEEEVKE IDSARARRRK AAYEMAIASG GASSLILSNY AQLLYEIDKD IERAEMYFKQ AVAAEPADGE AMRRYGMFLW
301: HARGDTGGAE DMFTGAIDAE PESSHHRSSY AWFLWMTGGV ETCLMDTGRQ SDGNDAD

Best Arabidopsis Sequence Match ( AT3G47080.1 )
(BLAST)

001: MEVKVATTTS FHWSGRHTAI PQCPSFSQTL TSSKRRRSRG IAGDVSVGGG SLRLKPSTFL GTQSGKLHRS KSCELWQFSN STTKKIRTDV KKKHNPLRRV
101: CSASSGFFSS DEAFSVKMQE LASQFRNAGD EEEEENKQKS EAVDNDNDSN NHRFGSLKLL QESVPGLASL EAPWAEMVNH SSIERKANSV DLPLSLRIIK
201: RKLQEEALKK ASATTYCSIN RAFSSMVFMI EELHSFALQT RVGVLKQVKK EMHASLLWIF QRVFSQTPTL MVYVMILLAN YTVHSVASNL PIAASPPVVN
301: KGPDQTQQRI DFSSLKESTK LDGSKWLGSI NFDKVSHLPR HRDSVSGEGM REEEVSLWNS MVEEADQMQD SSVDRDMRLR LVSPITARIE LDDYANYTRT
401: ELLYKIGLAQ EPDNHLLLAN YAQFLYLVTQ DHERAENCFK KAIESEDVDA ETYSKYAIFL WKVRNDLWAA EENFLEAISA DPTNSFYAAN YANFLWNTGG
501: EETCFPLEDS TQEMV

Arabidopsis Description

Tetratricopeptide repeat (TPR)-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SD65]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.