Factsheet for PGSC0003DMT400003940

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g090930.2.1	Tomato	nucleus	93.28	94.22
KRG92250	Soybean	cytosol	43.03	44.7
KRH34549	Soybean	nucleus	41.29	42.46
VIT_05s0049g01950.t01	Wine grape	plastid	51.24	38.79
HORVU5Hr1G031990.1	Barley	nucleus	10.95	37.29
Os04t0510600-01	Rice	plastid	21.39	31.05
PGSC0003DMT400035002	Potato	plastid	54.48	30.93
TraesCS2A01G367000.1	Wheat	plastid	19.65	29.26
TraesCS2D01G363900.1	Wheat	mitochondrion, plastid	19.4	28.89
Zm00001d003035_P001	Maize	plastid	18.66	26.98
GSMUA_Achr1P01000_001	Banana	plastid	17.91	26.57
HORVU2Hr1G088520.1	Barley	cytosol, nucleus, plastid	19.15	25.84
TraesCS5A01G512000.1	Wheat	mitochondrion, plastid	19.65	25.16
PGSC0003DMT400079441	Potato	plastid	14.43	25.0
TraesCS4B01G342900.1	Wheat	mitochondrion	19.4	24.76
EES12482	Sorghum	nucleus	19.9	24.24
Os03t0140700-01	Rice	plastid	20.4	24.19
EER92881	Sorghum	plastid	20.15	23.89
HORVU4Hr1G084230.1	Barley	mitochondrion, plastid	19.15	22.58
Zm00001d027613_P002	Maize	plastid	19.9	22.47
GSMUA_Achr5P15660_001	Banana	plastid	16.17	22.41
PGSC0003DMT400073455	Potato	plastid	13.18	22.18
PGSC0003DMT400022129	Potato	plastid	19.65	21.94
PGSC0003DMT400045174	Potato	plastid	14.43	19.21
PGSC0003DMT400001660	Potato	mitochondrion, nucleus, plastid	14.43	18.12
PGSC0003DMT400069757	Potato	plastid	10.95	9.84
PGSC0003DMT400078227	Potato	plastid	12.69	9.22

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:102581917	MapMan:35.2	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0006139	GO:GO:0006396	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	InterPro:HAT
InterPro:IPR011990	InterPro:IPR013026	UniProt:M0ZML1	EnsemblPlantsGene:PGSC0003DMG400001551	PGSC:PGSC0003DMG400001551	EnsemblPlants:PGSC0003DMT400003940
PFscan:PS50293	PANTHER:PTHR26312	PANTHER:PTHR26312:SF78	SMART:SM00386	SUPFAM:SSF48452	InterPro:TPR-contain_dom
InterPro:TPR-like_helical_dom_sf	UniParc:UPI0002953961	RefSeq:XP_006340887.1	RefSeq:XP_015160847.1	SEG:seg	:

Description

O-linked n-acetylglucosamine transferase, ogt [Source:PGSC_GENE;Acc:PGSC0003DMG400001551]

Coordinates

chr9:+:57340902..57345539

Molecular Weight (calculated)

44821.3 Da

IEP (calculated)

4.022

GRAVY (calculated)

-0.671

Length

402 amino acids

Sequence
(BLAST)

001: MLPKEPSFCI YNTEDGVDEL KENQDLVRSV TIGDIISDIG SSDFSFGKKG MGLIEEDENE DGGKRVFYEV NELGFEESEP VISSKYLGGV ESEPLDFDGN
101: GDVEEYYKRV LKEDPSNPLF LRNYAQLLQS KGDLCGAEHY YFQATLADPK DGDTLSQYAK LVWELHQDKD RASDYFERAV RAAPENSHVL GAYASFLWDI
201: NDDESEDEMN TQSDKTKIEE SGEATVSRNL DYEEANRPVS PPLHLAAGLG IGVNLVGGGS PVDYTAAVSD MDRNAEEEYM RMIKENPHNP VLLRNYAQFL
301: SQSKGDLLGA EEYYSRAILA DPTDGETISQ YAMLIWQLHR DKDKASTYFK RAVQASPEDG DVLAAYARFL WQTEEDEDGE EDETLGDHNG APPLQGVMAA
401: NA

Best Arabidopsis Sequence Match ( AT1G04530.1 )
(BLAST)

001: MLKSEASLSI YCDSGDGFKS EDPVTGIEEN LERTVTIGDA IDGGEFSFAK HKEEDSGEGE RGVFEEVIKK LGIGVRDELG FEIERPPSPP MHLAAGLGID
101: KFDLYGSEIK FDLPGYDDKN CGDYYKGMLE EYPLHPLLLK NYAKFLEYKG DLSGAEEYYH KCTVVEPSDG VALANYGRLV MKLHQDEAKA MSYFERAVQA
201: SPDDSIVLAA YASFLWEINA DDDDEDDDED DDESSGQGKD EFEADAAGKG KSSLSKTEDG ETLCRYAKAF WSINNDHEKA LFYFEKAVEA SPNDSIILGE
301: YARFLWEIDE

Arabidopsis Description

TPR4Tetratricopeptide repeat (TPR)-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8VZ31]
SUBAcon: [cytoskeleton,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.