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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid

Predictor Summary:
  • plastid 3
  • mitochondrion 3
  • cytosol 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
Predotar:mitochondrion
PProwler:plastid
TargetP:plastid
WoLF PSORT:mitochondrion
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2A01G367000.1 Wheat plastid 94.44 94.44
HORVU2Hr1G088520.1 Barley cytosol, nucleus, plastid 90.0 81.54
Os04t0510600-01 Rice plastid 69.26 67.51
Zm00001d003035_P001 Maize plastid 64.07 62.23
EES12482 Sorghum nucleus 67.78 55.45
VIT_07s0005g04340.t01 Wine grape cytosol, mitochondrion, nucleus 24.81 55.37
GSMUA_Achr1P01000_001 Banana plastid 41.11 40.96
KRG95736 Soybean cytosol, nucleus, plastid 28.89 36.62
GSMUA_Achr5P15660_001 Banana plastid 39.26 36.55
PGSC0003DMT400022129 Potato plastid 39.63 29.72
Solyc09g064630.2.1 Tomato plastid 38.89 29.41
KRH67454 Soybean nucleus 37.04 28.01
TraesCS7D01G374500.1 Wheat mitochondrion 29.26 27.92
CDX89816 Canola nucleus 27.41 25.43
CDY18241 Canola nucleus 26.67 24.83
Bra015324.1-P Field mustard nucleus 27.41 23.2
AT1G04530.1 Thale cress cytoskeleton, cytosol, nucleus 26.3 22.9
CDY59180 Canola cytosol 14.44 22.03
KRG92250 Soybean cytosol 31.48 21.96
KRH34549 Soybean nucleus 31.48 21.74
VIT_05s0049g01950.t01 Wine grape plastid 40.37 20.53
Solyc09g090930.2.1 Tomato nucleus 29.26 19.85
PGSC0003DMT400003940 Potato nucleus 28.89 19.4
Solyc03g005710.1.1 Tomato cytosol 25.19 17.99
TraesCS1D01G166000.1 Wheat plastid 19.63 15.41
PGSC0003DMT400035002 Potato plastid 39.26 14.97
TraesCS3D01G361500.1 Wheat plastid 23.7 13.33
TraesCS1D01G277900.1 Wheat plastid 21.48 12.24
Protein Annotations
EnsemblPlants:TraesCS2D01G363900.1EnsemblPlantsGene:TraesCS2D01G363900Gene3D:1.25.40.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR011990InterPro:IPR013026InterPro:TPR-contain_domInterPro:TPR-like_helical_dom_sfPANTHER:PTHR26312PANTHER:PTHR26312:SF78
PFscan:PS50293SEG:segSUPFAM:SSF48452MapMan:35.2::
Description
No Description!
Coordinates
chr2D:-:469739238..469740525
Molecular Weight (calculated)
29737.5 Da
IEP (calculated)
4.608
GRAVY (calculated)
-0.583
Length
270 amino acids
Sequence
(BLAST)
001: MLLRSSSTPF LRSFLTSSSS PTPPSSLQLR RAFSDGHLPS LNPSSSGDND SNRTTGLHTE LSFSVYNTFS KAKLEPHQEQ EMEEEQEQAP QPELPELPLF
101: LARGMGIDRL ASGLFTAGMG SEAALARMAS GVDQKAVLAL DAQYKEMVDE QPGNALFLRN YAQFLHEVKC DSRRAEEYYS RAMLADPTDG EIMSQYAKLV
201: WAVHRDHERS LTYFQKSVQA APRDSHVLAA YASFLWEQDE DEDDDGGLGG GEQGSPGRAT QPRQLASTAV
Best Arabidopsis Sequence Match ( AT5G20190.1 )
(BLAST)
001: MLLRSASTPL LNSLVHVSSP RDSPIETVES VHQIQRHRSI TLSASSSSCC YSPMSVHSSD DSSRRMKRTA SDSDLRHLTS TKPPVSKFLS GGALMEDVDE
101: GIGFGLIRTS SYDGISWALD EDTEVAGGGG GGMFHGGGKG RSGGRSDGGD GGDDNTDVHY RKMIEANPGN GIFLSNYAKF LKEVRKDYLK AEEYCGRAIL
201: VSPNDGNVLA MYAELVWKIH KDSSRAENYF NQAVAAAPED CYVQASYARF LWDAEEEEEE EKEERHEEEL EHQTSRMNFF TGPSPITAMS
Arabidopsis Description
Tetratricopeptide repeat (TPR)-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4K464]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.