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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 5
  • mitochondrion 1
  • cytosol 1
  • nucleus 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr1P01000_001 Banana plastid 60.34 64.58
VIT_07s0005g04340.t01 Wine grape cytosol, mitochondrion, nucleus 20.34 48.76
KRG95736 Soybean cytosol, nucleus, plastid 30.0 40.85
TraesCS5A01G512000.1 Wheat mitochondrion, plastid 43.45 40.13
Os04t0510600-01 Rice plastid 37.93 39.71
TraesCS4B01G342900.1 Wheat mitochondrion 42.76 39.37
TraesCS2D01G363900.1 Wheat mitochondrion, plastid 36.55 39.26
TraesCS2A01G367000.1 Wheat plastid 35.86 38.52
Zm00001d003035_P001 Maize plastid 36.55 38.13
EER92881 Sorghum plastid 44.48 38.05
Os03t0140700-01 Rice plastid 44.14 37.76
HORVU5Hr1G031990.1 Barley nucleus 14.83 36.44
KRH67454 Soybean nucleus 44.48 36.13
GSMUA_Achr2P15930_001 Banana cytosol 14.83 35.83
PGSC0003DMT400022129 Potato plastid 44.14 35.56
HORVU4Hr1G084230.1 Barley mitochondrion, plastid 41.38 35.19
Zm00001d027613_P002 Maize plastid 43.1 35.11
Solyc09g064630.2.1 Tomato plastid 42.76 34.73
HORVU2Hr1G088520.1 Barley cytosol, nucleus, plastid 35.52 34.56
EES12482 Sorghum nucleus 37.24 32.73
GSMUA_Achr5P03500_001 Banana plastid 24.83 28.92
GSMUA_Achr4P27320_001 Banana plastid 24.48 26.79
CDY59180 Canola cytosol 16.21 26.55
CDX89816 Canola nucleus 23.79 23.71
CDY18241 Canola nucleus 23.1 23.1
AT1G04530.1 Thale cress cytoskeleton, cytosol, nucleus 23.45 21.94
Bra015324.1-P Field mustard nucleus 23.79 21.63
VIT_05s0049g01950.t01 Wine grape plastid 37.93 20.72
KRH34549 Soybean nucleus 24.48 18.16
KRG92250 Soybean cytosol 24.14 18.09
PGSC0003DMT400003940 Potato nucleus 22.41 16.17
Solyc09g090930.2.1 Tomato nucleus 21.38 15.58
Solyc03g005710.1.1 Tomato cytosol 19.66 15.08
PGSC0003DMT400035002 Potato plastid 34.48 14.12
GSMUA_Achr11P... Banana plastid 19.66 11.42
GSMUA_Achr8P02280_001 Banana plastid 19.66 11.4
GSMUA_Achr9P03650_001 Banana plastid 18.97 10.85
GSMUA_Achr6P33690_001 Banana plastid 18.97 10.3
GSMUA_Achr5P28840_001 Banana cytosol 16.9 8.73
Protein Annotations
EnsemblPlants:GSMUA_Achr5P15660_001EnsemblPlants:GSMUA_Achr5T15660_001EnsemblPlantsGene:GSMUA_Achr5G15660_001Gene3D:1.25.40.10GO:GO:0003674GO:GO:0005488
GO:GO:0005515InterPro:IPR011990InterPro:IPR013026InterPro:TPR-contain_domInterPro:TPR-like_helical_dom_sfPANTHER:PTHR26312
PANTHER:PTHR26312:SF89PFscan:PS50293SEG:segSUPFAM:SSF48452UniParc:UPI000296F126UniProt:M0SYU5
MapMan:35.2:::::
Description
Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr5G15660_001]
Coordinates
chr5:-:11714440..11715834
Molecular Weight (calculated)
31730.5 Da
IEP (calculated)
4.859
GRAVY (calculated)
-0.629
Length
290 amino acids
Sequence
(BLAST)
001: MMLRSSSTPV LGSLLSSSSS LHISSECSNH HHHSSPNSDL HSFSCHLSPT SDGFRDQSPS LGIRRSRSDG NLRSFLSDRH PPSPKCPSQL PHTTLETILS
101: FSVYIRKTLA EEEAAEEEDD DENDGQRVDG GFDFASENRT GSASIGGPPP PPPLFLARGL GIDRIGSGLL TAGGGGGVGT CDVPMGNGGE QSDVEMHYKR
201: MVEENPSNAL FLRNYAEFLY QAKGDIKRAE EYYSRAILAD PDDGESLSQY ARLVWELHQD EERASSYFQQ AVQAAPHDRQ IIHESFPIQL
Best Arabidopsis Sequence Match ( AT5G20190.1 )
(BLAST)
001: MLLRSASTPL LNSLVHVSSP RDSPIETVES VHQIQRHRSI TLSASSSSCC YSPMSVHSSD DSSRRMKRTA SDSDLRHLTS TKPPVSKFLS GGALMEDVDE
101: GIGFGLIRTS SYDGISWALD EDTEVAGGGG GGMFHGGGKG RSGGRSDGGD GGDDNTDVHY RKMIEANPGN GIFLSNYAKF LKEVRKDYLK AEEYCGRAIL
201: VSPNDGNVLA MYAELVWKIH KDSSRAENYF NQAVAAAPED CYVQASYARF LWDAEEEEEE EKEERHEEEL EHQTSRMNFF TGPSPITAMS
Arabidopsis Description
Tetratricopeptide repeat (TPR)-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4K464]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.