Factsheet for HORVU2Hr1G033960.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
peroxisome 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G188500.1	Wheat	cytosol	94.23	93.72
TraesCS2B01G207100.2	Wheat	cytosol	93.68	93.68
TraesCS2A01G179800.1	Wheat	cytosol	94.23	93.46
KXG36628	Sorghum	cytosol	85.16	85.4
Os07t0598900-01	Rice	cytosol	84.89	84.89
Zm00001d022048_P002	Maize	cytosol	81.59	75.96
GSMUA_Achr6P24600_001	Banana	cytosol	70.05	68.92
CDY16163	Canola	cytosol	64.29	64.46
Bra024711.1-P	Field mustard	cytosol	64.01	64.19
CDX85025	Canola	cytosol	64.29	63.93
AT1G26520.1	Thale cress	cytosol	64.84	63.1
KRH75019	Soybean	cytosol	63.19	63.01
PGSC0003DMT400072954	Potato	cytosol	63.74	62.53
Solyc05g012460.2.1	Tomato	cytosol	63.46	62.26
KRH70873	Soybean	cytosol	46.15	56.38
HORVU6Hr1G086970.1	Barley	plastid	31.32	25.45

Protein Annotations

EnsemblPlants:HORVU2Hr1G033960.2	EnsemblPlantsGene:HORVU2Hr1G033960	Gene3D:3.30.1220.10	Gene3D:3.40.50.300	InterPro:Cbl_biosynth_CobW-like_C	InterPro:CobW-likC_sf
InterPro:CobW/HypB/UreG_dom	InterPro:IPR036627	InterPro:P-loop_NTPase	ncoils:Coil	PANTHER:PTHR13748	PANTHER:PTHR13748:SF31
PFAM:PF02492	PFAM:PF07683	SEG:seg	SMART:SM00833	SUPFAM:SSF52540	SUPFAM:SSF90002
UniParc:UPI000296B19E	UniProt:M0W6X4	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chrchr2H:+:136218665..136223453

Molecular Weight (calculated)

40775.4 Da

IEP (calculated)

4.612

GRAVY (calculated)

-0.223

Length

364 amino acids

Sequence
(BLAST)

001: MEDDDDCPPL AVELPPQRTS PLVPASSSAS APVGVTVITG YLGAGKSTLV NYILSGQHGK RIAVILNEFG EEIGVERAMI NEGQGGALVE EWVELANGCV
101: CCTVKHSLVQ ALEQLVQTKE RMDHILLETT GLADPAPLVS ILWLDDQLES SIRLDSIITV IDAKNFRRQI DEHTNSSSFP EAFHQIAFAD VVILNKIDLV
201: KDDLEDLERQ IHDVNELVTV VRSVRCQVDL NTIFDRQAYG VKNSSQLQEL LEYSKSAPPN SRHDNSISTL CIHEQDPVNL AKVESWLEDL LWEKKSNMDI
301: YRCKGILNIH NSNQLHTLQA VREVYEVVPA REWSETQPRM NKIVFIGRDL DISTLQDSFS RCKH

Best Arabidopsis Sequence Match ( AT1G26520.1 )
(BLAST)

001: MLKEEAEGVK MEDDDEEPPM AVQIHPDVSV GKVHSSSDTV SVGVSVITGY LGAGKSTLVN YILNGKHGKR IAVILNEFGE EIGVERAMIN EGEEGAIVEE
101: WVELANGCVC CTVKHSLVQA LEQLVQRKDR LDHILLETTG LANPAPLASI LWLDDQLESE VKLDCIVTVV DAKNLRFQLN ERRDSSSFPE AFNQIAFADT
201: IIMNKVDLIS QEESDELEKE IHSINSLANV IRSVRCQVDL SNILNCQAYD STHVSRLESL LEANKSLTTT DLHDSGVRTL CISEPQPINL DKVRLWLEEI
301: LWDKKSEMDV YRCKAVLSIQ NSDQMHILQA VRDIYEIVPA RKWSEEENRT NKIVFIGHKL DEEVLRSGLR DCRP

Arabidopsis Description

At1g26520 [Source:UniProtKB/TrEMBL;Acc:Q500W8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.