Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G033960.2 | Barley | cytosol | 93.68 | 93.68 |
| TraesCS2A01G179800.1 | Wheat | cytosol | 93.68 | 92.92 |
| TraesCS2D01G188500.1 | Wheat | cytosol | 93.13 | 92.62 |
| KXG36628 | Sorghum | cytosol | 83.79 | 84.02 |
| Os07t0598900-01 | Rice | cytosol | 83.52 | 83.52 |
| Zm00001d022048_P002 | Maize | cytosol | 80.22 | 74.68 |
| GSMUA_Achr6P24600_001 | Banana | cytosol | 69.78 | 68.65 |
| CDY16163 | Canola | cytosol | 63.74 | 63.91 |
| Bra024711.1-P | Field mustard | cytosol | 63.46 | 63.64 |
| CDX85025 | Canola | cytosol | 63.46 | 63.11 |
| KRH75019 | Soybean | cytosol | 62.64 | 62.47 |
| AT1G26520.1 | Thale cress | cytosol | 64.01 | 62.3 |
| PGSC0003DMT400072954 | Potato | cytosol | 63.46 | 62.26 |
| Solyc05g012460.2.1 | Tomato | cytosol | 63.46 | 62.26 |
| KRH70873 | Soybean | cytosol | 45.88 | 56.04 |
| TraesCS6B01G402400.1 | Wheat | plastid | 31.59 | 24.36 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G207100.2 | EnsemblPlantsGene:TraesCS2B01G207100 | Gene3D:3.30.1220.10 | Gene3D:3.40.50.300 | InterPro:Cbl_biosynth_CobW-like_C | InterPro:CobW-likC_sf |
| InterPro:CobW/HypB/UreG_dom | InterPro:IPR036627 | InterPro:P-loop_NTPase | ncoils:Coil | PANTHER:PTHR13748 | PANTHER:PTHR13748:SF31 |
| PFAM:PF02492 | PFAM:PF07683 | SEG:seg | SMART:SM00833 | SUPFAM:SSF52540 | SUPFAM:SSF90002 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2B:-:185812484..185815947
Molecular Weight (calculated)
40783.5 Da
IEP (calculated)
4.557
GRAVY (calculated)
-0.175
Length
364 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEDDDCPPL AVELPPQTTS PLVPASSSAS APVGVTIITG YLGAGKSTLV NYILSGQHGK RIAVILNEFG EEIGVERAMI NEGQGGAVVE EWVELANGCV
101: CCTVKHSLVQ ALEQLVQTKE RMDHILLETT GLADPAPLVS ILWLDDQLES SIRLDSIITV IDAKNFRRQI DEHTNSSSFP EAFHQIAFAD VVILNKIDLV
201: KDDLEDLERQ IHDVNALVTV VRSVRCQVDL NTIFDRQAYG VKNSSQLQEL LEYSKSAPPN SRHDNSISTL CIYEQDPVYL TKVESWLEDL LWEKKSNMDI
301: YRCKGILNIH NSNQLHTLQA VREVYEVVPA REWSETQSRM NKIVFIGRDL DISILQDSFS RCKH
101: CCTVKHSLVQ ALEQLVQTKE RMDHILLETT GLADPAPLVS ILWLDDQLES SIRLDSIITV IDAKNFRRQI DEHTNSSSFP EAFHQIAFAD VVILNKIDLV
201: KDDLEDLERQ IHDVNALVTV VRSVRCQVDL NTIFDRQAYG VKNSSQLQEL LEYSKSAPPN SRHDNSISTL CIYEQDPVYL TKVESWLEDL LWEKKSNMDI
301: YRCKGILNIH NSNQLHTLQA VREVYEVVPA REWSETQSRM NKIVFIGRDL DISILQDSFS RCKH
001: MLKEEAEGVK MEDDDEEPPM AVQIHPDVSV GKVHSSSDTV SVGVSVITGY LGAGKSTLVN YILNGKHGKR IAVILNEFGE EIGVERAMIN EGEEGAIVEE
101: WVELANGCVC CTVKHSLVQA LEQLVQRKDR LDHILLETTG LANPAPLASI LWLDDQLESE VKLDCIVTVV DAKNLRFQLN ERRDSSSFPE AFNQIAFADT
201: IIMNKVDLIS QEESDELEKE IHSINSLANV IRSVRCQVDL SNILNCQAYD STHVSRLESL LEANKSLTTT DLHDSGVRTL CISEPQPINL DKVRLWLEEI
301: LWDKKSEMDV YRCKAVLSIQ NSDQMHILQA VRDIYEIVPA RKWSEEENRT NKIVFIGHKL DEEVLRSGLR DCRP
101: WVELANGCVC CTVKHSLVQA LEQLVQRKDR LDHILLETTG LANPAPLASI LWLDDQLESE VKLDCIVTVV DAKNLRFQLN ERRDSSSFPE AFNQIAFADT
201: IIMNKVDLIS QEESDELEKE IHSINSLANV IRSVRCQVDL SNILNCQAYD STHVSRLESL LEANKSLTTT DLHDSGVRTL CISEPQPINL DKVRLWLEEI
301: LWDKKSEMDV YRCKAVLSIQ NSDQMHILQA VRDIYEIVPA RKWSEEENRT NKIVFIGHKL DEEVLRSGLR DCRP
Arabidopsis Description
At1g26520 [Source:UniProtKB/TrEMBL;Acc:Q500W8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.