Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G179800.1 | Wheat | cytosol | 96.17 | 95.91 |
| HORVU2Hr1G033960.2 | Barley | cytosol | 93.72 | 94.23 |
| TraesCS2B01G207100.2 | Wheat | cytosol | 92.62 | 93.13 |
| KXG36628 | Sorghum | cytosol | 84.97 | 85.67 |
| Os07t0598900-01 | Rice | cytosol | 84.7 | 85.16 |
| Zm00001d022048_P002 | Maize | cytosol | 80.87 | 75.7 |
| GSMUA_Achr6P24600_001 | Banana | cytosol | 68.58 | 67.84 |
| CDY16163 | Canola | cytosol | 63.66 | 64.19 |
| Bra024711.1-P | Field mustard | cytosol | 63.39 | 63.91 |
| CDX85025 | Canola | cytosol | 63.11 | 63.11 |
| AT1G26520.1 | Thale cress | cytosol | 64.21 | 62.83 |
| KRH75019 | Soybean | cytosol | 62.02 | 62.19 |
| PGSC0003DMT400072954 | Potato | cytosol | 62.84 | 61.99 |
| Solyc05g012460.2.1 | Tomato | cytosol | 62.3 | 61.46 |
| KRH70873 | Soybean | cytosol | 46.17 | 56.71 |
| TraesCS6D01G350100.1 | Wheat | plastid | 31.69 | 26.61 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G188500.1 | EnsemblPlantsGene:TraesCS2D01G188500 | Gene3D:3.30.1220.10 | Gene3D:3.40.50.300 | InterPro:Cbl_biosynth_CobW-like_C | InterPro:CobW-likC_sf |
| InterPro:CobW/HypB/UreG_dom | InterPro:IPR036627 | InterPro:P-loop_NTPase | ncoils:Coil | PANTHER:PTHR13748 | PANTHER:PTHR13748:SF31 |
| PFAM:PF02492 | PFAM:PF07683 | SEG:seg | SMART:SM00833 | SUPFAM:SSF52540 | SUPFAM:SSF90002 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2D:-:131470393..131474649
Molecular Weight (calculated)
40863.6 Da
IEP (calculated)
4.557
GRAVY (calculated)
-0.170
Length
366 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDDDECPPL AVELPPQTTS PLVPASAPAS ASAPVGVTVI TGYLGAGKST LVNYILSGQH GKRIAVILNE FGEEIGVERA MINEGQGGAI VEEWVELANG
101: CVCCTVKHSL VQALEQLVQT KERMDHILLE TTGLADPAPL VSILWLDDQL ESSIRLDSII TVIDAKNFRR QIDEHTNSSS FPEAFHQIAF ADVVILNKID
201: LVKDNLEDLE RQIHDVNALV TVVRSVRCQV DLNTIFDRQA YGVKNSSQLQ ELLEYSKSAP PNSRHDNSIS TLCIYEQDPV CLTKVESWLE DLLWEKKSNM
301: DIYRCKGILN IHDSNQLHTL QAVREVYEVV PAREWSETQS RMNKIVFIGR DLDISTLQDS FSRCKH
101: CVCCTVKHSL VQALEQLVQT KERMDHILLE TTGLADPAPL VSILWLDDQL ESSIRLDSII TVIDAKNFRR QIDEHTNSSS FPEAFHQIAF ADVVILNKID
201: LVKDNLEDLE RQIHDVNALV TVVRSVRCQV DLNTIFDRQA YGVKNSSQLQ ELLEYSKSAP PNSRHDNSIS TLCIYEQDPV CLTKVESWLE DLLWEKKSNM
301: DIYRCKGILN IHDSNQLHTL QAVREVYEVV PAREWSETQS RMNKIVFIGR DLDISTLQDS FSRCKH
001: MLKEEAEGVK MEDDDEEPPM AVQIHPDVSV GKVHSSSDTV SVGVSVITGY LGAGKSTLVN YILNGKHGKR IAVILNEFGE EIGVERAMIN EGEEGAIVEE
101: WVELANGCVC CTVKHSLVQA LEQLVQRKDR LDHILLETTG LANPAPLASI LWLDDQLESE VKLDCIVTVV DAKNLRFQLN ERRDSSSFPE AFNQIAFADT
201: IIMNKVDLIS QEESDELEKE IHSINSLANV IRSVRCQVDL SNILNCQAYD STHVSRLESL LEANKSLTTT DLHDSGVRTL CISEPQPINL DKVRLWLEEI
301: LWDKKSEMDV YRCKAVLSIQ NSDQMHILQA VRDIYEIVPA RKWSEEENRT NKIVFIGHKL DEEVLRSGLR DCRP
101: WVELANGCVC CTVKHSLVQA LEQLVQRKDR LDHILLETTG LANPAPLASI LWLDDQLESE VKLDCIVTVV DAKNLRFQLN ERRDSSSFPE AFNQIAFADT
201: IIMNKVDLIS QEESDELEKE IHSINSLANV IRSVRCQVDL SNILNCQAYD STHVSRLESL LEANKSLTTT DLHDSGVRTL CISEPQPINL DKVRLWLEEI
301: LWDKKSEMDV YRCKAVLSIQ NSDQMHILQA VRDIYEIVPA RKWSEEENRT NKIVFIGHKL DEEVLRSGLR DCRP
Arabidopsis Description
At1g26520 [Source:UniProtKB/TrEMBL;Acc:Q500W8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.