Factsheet for TraesCS2A01G179800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G188500.1	Wheat	cytosol	95.91	96.17
HORVU2Hr1G033960.2	Barley	cytosol	93.46	94.23
TraesCS2B01G207100.2	Wheat	cytosol	92.92	93.68
KXG36628	Sorghum	cytosol	84.74	85.67
Os07t0598900-01	Rice	cytosol	83.65	84.34
Zm00001d022048_P002	Maize	cytosol	81.2	76.21
GSMUA_Achr6P24600_001	Banana	cytosol	68.12	67.57
CDY16163	Canola	cytosol	63.22	63.91
Bra024711.1-P	Field mustard	cytosol	62.94	63.64
CDX85025	Canola	cytosol	62.94	63.11
KRH75019	Soybean	cytosol	62.4	62.74
AT1G26520.1	Thale cress	cytosol	62.67	61.5
PGSC0003DMT400072954	Potato	cytosol	62.13	61.46
Solyc05g012460.2.1	Tomato	cytosol	61.85	61.19
KRH70873	Soybean	cytosol	46.32	57.05
TraesCS2A01G439900.1	Wheat	mitochondrion	31.88	29.03
TraesCS6A01G367100.1	Wheat	plastid	32.15	26.28

Protein Annotations

EnsemblPlants:TraesCS2A01G179800.1	EnsemblPlantsGene:TraesCS2A01G179800	Gene3D:3.30.1220.10	Gene3D:3.40.50.300	InterPro:Cbl_biosynth_CobW-like_C	InterPro:CobW-likC_sf
InterPro:CobW/HypB/UreG_dom	InterPro:IPR036627	InterPro:P-loop_NTPase	ncoils:Coil	PANTHER:PTHR13748	PANTHER:PTHR13748:SF31
PFAM:PF02492	PFAM:PF07683	SEG:seg	SMART:SM00833	SUPFAM:SSF52540	SUPFAM:SSF90002
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr2A:-:138188970..138192325

Molecular Weight (calculated)

40881.6 Da

IEP (calculated)

4.554

GRAVY (calculated)

-0.146

Length

367 amino acids

Sequence
(BLAST)

001: MEIGDDDCPP LAVELPPQTA SPPFPASSSA SASAPVGVTV ITGYLGAGKS TLVNYILSGQ HGKRIAVILN EFGEEIGVER AMINEGQGGA VVEEWVELAN
101: GCVCCTVKHS LVQALEQLVQ TKERMDHILL ETTGLADPAP LVSILWLDDQ LESSIRLDSI ITVIDAKNFR RQIDEHTNSS SFPEAFHQIA FADVVILNKI
201: DLVKDDLEDL ERQIHDVNAL VTVVRSVRCQ VDLNTIFDRQ AYGVKNSSQL QELLEYSKSA PPNSRHDNSI STLCIYEQDP VCLAKVESWL EDLLWEKKSN
301: MDIYRCKGIL NIHDSNQLHT LQAVREVYEV VPAREWSETQ SRMNKIVFIG RDLDISILQD SFSRCKH

Best Arabidopsis Sequence Match ( AT1G26520.1 )
(BLAST)

001: MLKEEAEGVK MEDDDEEPPM AVQIHPDVSV GKVHSSSDTV SVGVSVITGY LGAGKSTLVN YILNGKHGKR IAVILNEFGE EIGVERAMIN EGEEGAIVEE
101: WVELANGCVC CTVKHSLVQA LEQLVQRKDR LDHILLETTG LANPAPLASI LWLDDQLESE VKLDCIVTVV DAKNLRFQLN ERRDSSSFPE AFNQIAFADT
201: IIMNKVDLIS QEESDELEKE IHSINSLANV IRSVRCQVDL SNILNCQAYD STHVSRLESL LEANKSLTTT DLHDSGVRTL CISEPQPINL DKVRLWLEEI
301: LWDKKSEMDV YRCKAVLSIQ NSDQMHILQA VRDIYEIVPA RKWSEEENRT NKIVFIGHKL DEEVLRSGLR DCRP

Arabidopsis Description

At1g26520 [Source:UniProtKB/TrEMBL;Acc:Q500W8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.