Factsheet for TraesCS6A01G367100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G086970.1	Barley	plastid	96.66	96.88
TraesCS6D01G350100.1	Wheat	plastid	91.98	94.72
TraesCS6B01G402400.1	Wheat	plastid	87.08	82.84
Os02t0800000-01	Rice	plastid	82.41	82.77
KXG31288	Sorghum	plastid	83.07	82.34
Zm00001d018401_P001	Maize	plastid	77.95	79.73
KRH36213	Soybean	nucleus	68.37	68.83
PGSC0003DMT400036661	Potato	plastid	67.04	66.3
GSMUA_Achr7P20870_001	Banana	plastid	67.26	66.08
AT1G80480.1	Thale cress	plastid	65.26	65.99
Solyc03g117430.2.1	Tomato	plastid	67.04	65.58
AT1G15730.1	Thale cress	plastid	65.03	65.18
VIT_09s0002g08260.t01	Wine grape	plastid	65.92	65.05
CDY36582	Canola	plastid	63.92	64.93
KRG92963	Soybean	nucleus	67.26	64.81
CDY33389	Canola	plastid	63.7	63.98
Bra008470.1-P	Field mustard	plastid	64.81	63.96
CDY38672	Canola	plastid	64.59	63.6
Bra026114.1-P	Field mustard	plastid	63.25	63.39
CDY72248	Canola	plastid	43.88	62.74
VIT_09s0002g08230.t01	Wine grape	cytosol	20.04	55.21
TraesCS2A01G439900.1	Wheat	mitochondrion	48.11	53.6
TraesCS2A01G179800.1	Wheat	cytosol	26.28	32.15

Protein Annotations

EnsemblPlants:TraesCS6A01G367100.1	EnsemblPlantsGene:TraesCS6A01G367100	Gene3D:3.30.1220.10	Gene3D:3.40.50.300	InterPro:Cbl_biosynth_CobW-like_C	InterPro:CobW-likC_sf
InterPro:CobW/HypB/UreG_dom	InterPro:IPR036627	InterPro:P-loop_NTPase	PANTHER:PTHR13748	PANTHER:PTHR13748:SF43	PFAM:PF02492
PFAM:PF07683	SEG:seg	SMART:SM00833	SUPFAM:SSF52540	SUPFAM:SSF90002	MapMan:15.6.1.2.3.7

Description

No Description!

Coordinates

chr6A:+:594430174..594434562

Molecular Weight (calculated)

49845.0 Da

IEP (calculated)

6.276

GRAVY (calculated)

-0.372

Length

449 amino acids

Sequence
(BLAST)

001: MAALCSAASP AVARAAALGL SARGPASLLP LRLRLRAATR SCYAAPRAAP VAASWRARRR FAASAASTTE EGADVDTVIP PDNRIPATII TGFLGSGKTT
101: LLNHILTSHH GKRIAVIENE YGEVDIDGSL VAAQTAGAED IMMLNNGCLC CTVRGDLVRM ISELVDKKKG KFDHLVIETT GLANPAPIIQ TFYAEDTVFN
201: DVKLDGVVTL VDSKHARLHL DEVKPKGIVN EAVQQIAYAD RIIINKTDLV SEPEVSSLVE RIRSINRMAN LKRAQYGKVD LDYVLGIGGF DLERIESAVT
301: EEPHDEHEHE HEHKHEHEHH HDHAHDHDHD HHHHDHDHKH DHHAHDHTHD PGVSSVSIVC EGEMDLEKAD MWLGNLLLER SDDIYRMKGL LSVSGMPQRF
401: VFQGVHDIFE GSPDRMWEPN EPRINKIVFI GRNLNREELE TGFKDCLLK

Best Arabidopsis Sequence Match ( AT1G80480.1 )
(BLAST)

001: MATLSTLEIA TTFLSFTAPR SSAAFNYRFS SAAVSVLSRP RATTVSVRTT PSFFYSPVVR RQRFSSVSAS ATQTEDSDVT TKIPPDNRIP ATIITGFLGS
101: GKTTLLNHIL TRDHGKRIAV IENEFGEVDI DGSLVASKSI GAEDIVMLNN GCLCCTVRGD LVRMIGELVN TKKGKFDHIV IETTGLANPA PIIQTFYAEE
201: EIFNDVKLDG VVTLVDAKHA RLHLDEVKPE GVVNEAVEQI AYADRIIVNK TDLVGEAELG SVVQRIKTIN SMAQMTRTKY GNVDLDYVLG IGGFDLERIE
301: SSVNEDDKGD HHDHDHDHHH DHNHDHDHHH HDGHDHHHHS HDHTHDPGVS SVSIVCEGSL DLEKANMWLG TLLMERSEDI YRMKGLLSVH TMEERFVFQG
401: VHDIFQGSPD RLWGREEERV NKIVFIGKNL NREELEKGFK ACLI

Arabidopsis Description

PTAC17At1g80480 [Source:UniProtKB/TrEMBL;Acc:Q9M8L6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.