Skip to main content
crop-pal logo
Thale cress
Search for another protein from :
Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 8
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:cytosol
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY38672 Canola plastid 79.73 77.63
Bra008470.1-P Field mustard plastid 79.28 77.36
CDY72248 Canola plastid 54.28 76.75
AT1G15730.1 Thale cress plastid 74.1 73.44
VIT_09s0002g08260.t01 Wine grape plastid 72.52 70.77
KRH36213 Soybean nucleus 70.27 69.96
TraesCS6D01G350100.1 Wheat plastid 66.89 68.12
PGSC0003DMT400036661 Potato plastid 69.59 68.06
Solyc03g117430.2.1 Tomato plastid 70.27 67.97
GSMUA_Achr7P20870_001 Banana plastid 69.82 67.83
Os02t0800000-01 Rice plastid 66.89 66.44
HORVU6Hr1G086970.1 Barley plastid 66.67 66.07
KXG31288 Sorghum plastid 67.34 66.0
KRG92963 Soybean nucleus 68.92 65.67
TraesCS6A01G367100.1 Wheat plastid 65.99 65.26
Zm00001d018401_P001 Maize plastid 63.96 64.69
TraesCS6B01G402400.1 Wheat plastid 67.12 63.14
VIT_09s0002g08230.t01 Wine grape cytosol 21.62 58.9
AT1G26520.1 Thale cress cytosol 29.28 34.76
Protein Annotations
MapMan:15.6.1.2.3.7Gene3D:3.30.1220.10Gene3D:3.40.50.300EntrezGene:844387ProteinID:AAF27129.1ProteinID:AEE36410.1
ArrayExpress:AT1G80480EnsemblPlantsGene:AT1G80480RefSeq:AT1G80480TAIR:AT1G80480RefSeq:AT1G80480-TAIR-GEnsemblPlants:AT1G80480.1
TAIR:AT1G80480.1Unigene:At.33893EMBL:BT014948EMBL:BT015396InterPro:Cbl_biosynth_CobW-like_CInterPro:CobW-likC_sf
InterPro:CobW/HypB/UreG_domGO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0009295
GO:GO:0009507GO:GO:0009508GO:GO:0009536GO:GO:0009570InterPro:IPR036627RefSeq:NP_178163.1
InterPro:P-loop_NTPasePFAM:PF02492PFAM:PF07683PO:PO:0000013PO:PO:0000037PO:PO:0000230
PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507
PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123
PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009
PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032
PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100
PO:PO:0020137PO:PO:0025022PO:PO:0025281Symbol:PTAC17PANTHER:PTHR13748PANTHER:PTHR13748:SF43
UniProt:Q9M8L6SMART:SM00833SUPFAM:SSF52540SUPFAM:SSF90002UniParc:UPI00000A6C96SEG:seg
Description
PTAC17At1g80480 [Source:UniProtKB/TrEMBL;Acc:Q9M8L6]
Coordinates
chr1:-:30258005..30260732
Molecular Weight (calculated)
49490.4 Da
IEP (calculated)
6.049
GRAVY (calculated)
-0.332
Length
444 amino acids
Sequence
(BLAST)
001: MATLSTLEIA TTFLSFTAPR SSAAFNYRFS SAAVSVLSRP RATTVSVRTT PSFFYSPVVR RQRFSSVSAS ATQTEDSDVT TKIPPDNRIP ATIITGFLGS
101: GKTTLLNHIL TRDHGKRIAV IENEFGEVDI DGSLVASKSI GAEDIVMLNN GCLCCTVRGD LVRMIGELVN TKKGKFDHIV IETTGLANPA PIIQTFYAEE
201: EIFNDVKLDG VVTLVDAKHA RLHLDEVKPE GVVNEAVEQI AYADRIIVNK TDLVGEAELG SVVQRIKTIN SMAQMTRTKY GNVDLDYVLG IGGFDLERIE
301: SSVNEDDKGD HHDHDHDHHH DHNHDHDHHH HDGHDHHHHS HDHTHDPGVS SVSIVCEGSL DLEKANMWLG TLLMERSEDI YRMKGLLSVH TMEERFVFQG
401: VHDIFQGSPD RLWGREEERV NKIVFIGKNL NREELEKGFK ACLI
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.