CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38672	Canola	plastid	82.8	57.02
AT1G80480.1	Thale cress	plastid	76.75	54.28
CDY36582	Canola	plastid	72.93	51.81
CDY33389	Canola	plastid	71.34	50.11
VIT_09s0002g08260.t01	Wine grape	plastid	66.56	45.93
KRH36213	Soybean	nucleus	64.97	45.74
Zm00001d018401_P001	Maize	plastid	62.74	44.87
TraesCS6D01G350100.1	Wheat	plastid	62.1	44.72
KXG31288	Sorghum	plastid	64.01	44.37
GSMUA_Achr7P20870_001	Banana	plastid	64.01	43.98
HORVU6Hr1G086970.1	Barley	plastid	62.74	43.97
TraesCS6A01G367100.1	Wheat	plastid	62.74	43.88
Os02t0800000-01	Rice	plastid	62.42	43.85
PGSC0003DMT400036661	Potato	plastid	63.06	43.61
KRG92963	Soybean	nucleus	64.65	43.56
Solyc03g117430.2.1	Tomato	plastid	62.74	42.92
TraesCS6B01G402400.1	Wheat	plastid	61.78	41.1
CDY16163	Canola	cytosol	28.98	25.07
CDX85025	Canola	cytosol	28.98	24.86
VIT_09s0002g08230.t01	Wine grape	cytosol	6.05	11.66

Protein Annotations

EnsemblPlants:CDY72248	EnsemblPlantsGene:GSBRNA2T00025970001	Gene3D:3.40.50.300	InterPro:CobW/HypB/UreG_dom	InterPro:P-loop_NTPase	PANTHER:PTHR13748
PANTHER:PTHR13748:SF43	PFAM:PF02492	ProteinID:CDY72248	ProteinID:CDY72248.1	SEG:seg	SUPFAM:SSF52540
UniParc:UPI0004EE3D87	UniProt:A0A078JX93	MapMan:15.6.1.2.3.7	:	:	:

Description

BnaAnng40400DBnaAnng40400D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JX93]

Coordinates

chrLK049737:+:407..1954

Molecular Weight (calculated)

34126.1 Da

IEP (calculated)

7.130

GRAVY (calculated)

0.033

Length

314 amino acids

Sequence
(BLAST)

001: MATLSKLEMA TTFLAFTSPR SATALNYRFS SAAVPIFSWR IATPVSVRAK PSLLYPPVVN SKRLRKFSSV SASASASAPP QTDDSDVTTK IPPDNRIPAT
101: IITGFLGSGK TTLLNHILTR DHGKRIAVIE NEFGEVDIDG SLVASKSVGA EDIVMLNNGC LCCTVRGDLV RMISELVNKK KGKFDHIVIE TTGLANPAPI
201: IQTFYAEEEI FNDVKLDGVV TLVDAKHARL HLDEVKPKGV VNEAVEQIAY ADRIIVNKTD LVGESELGSV VQRIKTINSM AQMTRTNYGN VDLDYVLGIG
301: GFDLERSASF LFHL

Best Arabidopsis Sequence Match ( AT1G80480.1 )
(BLAST)

001: MATLSTLEIA TTFLSFTAPR SSAAFNYRFS SAAVSVLSRP RATTVSVRTT PSFFYSPVVR RQRFSSVSAS ATQTEDSDVT TKIPPDNRIP ATIITGFLGS
101: GKTTLLNHIL TRDHGKRIAV IENEFGEVDI DGSLVASKSI GAEDIVMLNN GCLCCTVRGD LVRMIGELVN TKKGKFDHIV IETTGLANPA PIIQTFYAEE
201: EIFNDVKLDG VVTLVDAKHA RLHLDEVKPE GVVNEAVEQI AYADRIIVNK TDLVGEAELG SVVQRIKTIN SMAQMTRTKY GNVDLDYVLG IGGFDLERIE
301: SSVNEDDKGD HHDHDHDHHH DHNHDHDHHH HDGHDHHHHS HDHTHDPGVS SVSIVCEGSL DLEKANMWLG TLLMERSEDI YRMKGLLSVH TMEERFVFQG
401: VHDIFQGSPD RLWGREEERV NKIVFIGKNL NREELEKGFK ACLI

Arabidopsis Description

PTAC17At1g80480 [Source:UniProtKB/TrEMBL;Acc:Q9M8L6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.