Factsheet for Os02t0800000-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
peroxisome 1
cytosol 1
plastid 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	secretory
EpiLoc:	peroxisome
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

plastid: 21433289
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG31288	Sorghum	plastid	85.68	84.55
TraesCS6D01G350100.1	Wheat	plastid	82.1	84.17
HORVU6Hr1G086970.1	Barley	plastid	82.77	82.59
TraesCS6A01G367100.1	Wheat	plastid	82.77	82.41
Zm00001d018401_P001	Maize	plastid	77.85	79.27
TraesCS6B01G402400.1	Wheat	plastid	82.33	77.97
VIT_09s0002g08260.t01	Wine grape	plastid	69.35	68.13
GSMUA_Achr7P20870_001	Banana	plastid	69.13	67.61
AT1G80480.1	Thale cress	plastid	66.44	66.89
KRH36213	Soybean	nucleus	66.22	66.37
PGSC0003DMT400036661	Potato	plastid	66.67	65.64
AT1G15730.1	Thale cress	plastid	65.32	65.18
CDY36582	Canola	plastid	64.43	65.16
Solyc03g117430.2.1	Tomato	plastid	66.89	65.14
CDY33389	Canola	plastid	64.21	64.21
Bra008470.1-P	Field mustard	plastid	65.1	63.96
Bra026114.1-P	Field mustard	plastid	63.76	63.62
CDY38672	Canola	plastid	64.88	63.6
KRG92963	Soybean	nucleus	66.0	63.3
CDY72248	Canola	plastid	43.85	62.42
VIT_09s0002g08230.t01	Wine grape	cytosol	20.81	57.06
Os04t0599700-01	Rice	mitochondrion	46.98	51.09
Os07t0598900-01	Rice	cytosol	27.07	33.24

Protein Annotations

MapMan:15.6.1.2.3.7	Gene3D:3.30.1220.10	Gene3D:3.40.50.300	EntrezGene:4331034	EMBL:AK243402	ProteinID:BAD36713.1
ProteinID:BAS81398.1	InterPro:Cbl_biosynth_CobW-like_C	InterPro:CobW-likC_sf	InterPro:CobW/HypB/UreG_dom	InterPro:IPR036627	EnsemblPlantsGene:Os02g0800000
EnsemblPlants:Os02t0800000-01	InterPro:P-loop_NTPase	PFAM:PF02492	PFAM:PF07683	PANTHER:PTHR13748	PANTHER:PTHR13748:SF43
UniProt:Q69IK7	SMART:SM00833	SUPFAM:SSF52540	SUPFAM:SSF90002	UniParc:UPI0000403B2C	RefSeq:XP_015626576.1
SEG:seg	:	:	:	:	:

Description

PRLI-interacting factor L (Fragment). (Os02t0800000-01)

Coordinates

chr2:+:34071030..34075500

Molecular Weight (calculated)

49169.6 Da

IEP (calculated)

6.534

GRAVY (calculated)

-0.302

Length

447 amino acids

Sequence
(BLAST)

001: MAAALCSASP AISAAAAAAL GAAARRLRVR VRAASRPYCA APAPPRAAAA VGAQSWRARR RFAASAASTT TEEEEEGAGA EVMIPPDNRI PATIITGFLG
101: SGKTTLLNHI LTAHHGKRIA VIENEYGEVD IDGSLVAAQT AGAEDIMMLN NGCLCCTVRG DLVRMIGELV DKKKGKFDHI IIETTGLANP APIIQTFYAE
201: DTVFNDVKLD GVVTLVDAKH ARLHLDEVKP KGIVNEAVQQ IAYADRIIVN KIDLVSEPEV SSLVERIRSM NRMAHLKRAE YGKVDLDYVL GIGGFDLERI
301: ESAVTEVSHD HHTGHEHKHD HEHHHHDHHH HDHEHKHDHH AHDHTHDPGV SSVSIVCEGE MDLEKADMWL GNLLLERSDD IYRMKGLLSV SGMPQRFVFQ
401: GVHDIFQGSP ERMWEPNEPR INKIVFIGKN LNGEELEKGF KDCLLKK

Best Arabidopsis Sequence Match ( AT1G80480.1 )
(BLAST)

001: MATLSTLEIA TTFLSFTAPR SSAAFNYRFS SAAVSVLSRP RATTVSVRTT PSFFYSPVVR RQRFSSVSAS ATQTEDSDVT TKIPPDNRIP ATIITGFLGS
101: GKTTLLNHIL TRDHGKRIAV IENEFGEVDI DGSLVASKSI GAEDIVMLNN GCLCCTVRGD LVRMIGELVN TKKGKFDHIV IETTGLANPA PIIQTFYAEE
201: EIFNDVKLDG VVTLVDAKHA RLHLDEVKPE GVVNEAVEQI AYADRIIVNK TDLVGEAELG SVVQRIKTIN SMAQMTRTKY GNVDLDYVLG IGGFDLERIE
301: SSVNEDDKGD HHDHDHDHHH DHNHDHDHHH HDGHDHHHHS HDHTHDPGVS SVSIVCEGSL DLEKANMWLG TLLMERSEDI YRMKGLLSVH TMEERFVFQG
401: VHDIFQGSPD RLWGREEERV NKIVFIGKNL NREELEKGFK ACLI

Arabidopsis Description

PTAC17At1g80480 [Source:UniProtKB/TrEMBL;Acc:Q9M8L6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.