Factsheet for Bra008470.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
peroxisome 1
mitochondrion 1
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38672	Canola	plastid	97.14	96.93
AT1G80480.1	Thale cress	plastid	77.36	79.28
Bra026114.1-P	Field mustard	plastid	71.65	72.77
VIT_09s0002g08260.t01	Wine grape	plastid	70.99	70.99
KRH36213	Soybean	nucleus	67.69	69.06
TraesCS6D01G350100.1	Wheat	plastid	64.4	67.2
PGSC0003DMT400036661	Potato	plastid	66.81	66.96
GSMUA_Achr7P20870_001	Banana	plastid	67.25	66.96
Solyc03g117430.2.1	Tomato	plastid	66.59	66.01
KRG92963	Soybean	nucleus	66.81	65.24
HORVU6Hr1G086970.1	Barley	plastid	64.18	65.18
Os02t0800000-01	Rice	plastid	63.96	65.1
TraesCS6A01G367100.1	Wheat	plastid	63.96	64.81
KXG31288	Sorghum	plastid	64.18	64.46
Zm00001d018401_P001	Maize	plastid	60.88	63.1
TraesCS6B01G402400.1	Wheat	plastid	63.74	61.44
VIT_09s0002g08230.t01	Wine grape	cytosol	20.88	58.28
Bra024711.1-P	Field mustard	cytosol	27.25	34.16

Protein Annotations

MapMan:15.6.1.2.3.7	Gene3D:3.30.1220.10	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra008470	EnsemblPlants:Bra008470.1	EnsemblPlants:Bra008470.1-P
InterPro:Cbl_biosynth_CobW-like_C	InterPro:CobW-likC_sf	InterPro:CobW/HypB/UreG_dom	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0009295	GO:GO:0009507	GO:GO:0009508	GO:GO:0009536	GO:GO:0009570
InterPro:IPR036627	UniProt:M4CW73	InterPro:P-loop_NTPase	PFAM:PF02492	PFAM:PF07683	PANTHER:PTHR13748
PANTHER:PTHR13748:SF43	SMART:SM00833	SUPFAM:SSF52540	SUPFAM:SSF90002	UniParc:UPI0002546C3F	SEG:seg

Description

AT1G80480 (E=2e-177) PTAC17 | PTAC17 (PLASTID TRANSCRIPTIONALLY ACTIVE17)

Coordinates

chrA02:+:15829130..15831363

Molecular Weight (calculated)

50592.1 Da

IEP (calculated)

6.449

GRAVY (calculated)

-0.347

Length

455 amino acids

Sequence
(BLAST)

001: MATLSKLEMA TTFLAFTSPR SATALNYRFS SAAVPIFSRR IAKPVSVRAK PSLLYPPVVN SKRLRKFSSV SASASASAPP QTDDSDVTTK IPPDNRIPAT
101: IITGFLGSGK TTLLNHILTR DHGKRIAVIE NEFGEVDIDG SLVASKSVGA EDIVMLNNGC LCCTVRGDLV RMISELVNKK KGKFDHIVIE TTGLANPAPI
201: IQTFYAEEEI FNDVKLDGVV TLVDAKHARL HLDEVKPKGV VNEAVEQIAY ADRIIVNKTD LVGESELGSV VQRIKTINSM AQMTRTNYGN VDLDYVLGIG
301: GFDLERIESS VTTEDDKKGH DECHDEHHHD HDHHHHDHHH HNEHEHNHSH DHDHTHDPGV SSVSIVCEGS LDLDKANMWL GTLLMERSED IYRMKGLLSV
401: HTMEERFVFQ GVHDIFQGSP DRLWGKDEAR VNKMVFIGKN LNREELEKGF KACLI

Best Arabidopsis Sequence Match ( AT1G80480.1 )
(BLAST)

001: MATLSTLEIA TTFLSFTAPR SSAAFNYRFS SAAVSVLSRP RATTVSVRTT PSFFYSPVVR RQRFSSVSAS ATQTEDSDVT TKIPPDNRIP ATIITGFLGS
101: GKTTLLNHIL TRDHGKRIAV IENEFGEVDI DGSLVASKSI GAEDIVMLNN GCLCCTVRGD LVRMIGELVN TKKGKFDHIV IETTGLANPA PIIQTFYAEE
201: EIFNDVKLDG VVTLVDAKHA RLHLDEVKPE GVVNEAVEQI AYADRIIVNK TDLVGEAELG SVVQRIKTIN SMAQMTRTKY GNVDLDYVLG IGGFDLERIE
301: SSVNEDDKGD HHDHDHDHHH DHNHDHDHHH HDGHDHHHHS HDHTHDPGVS SVSIVCEGSL DLEKANMWLG TLLMERSEDI YRMKGLLSVH TMEERFVFQG
401: VHDIFQGSPD RLWGREEERV NKIVFIGKNL NREELEKGFK ACLI

Arabidopsis Description

PTAC17At1g80480 [Source:UniProtKB/TrEMBL;Acc:Q9M8L6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.