Factsheet for VIT_09s0002g08230.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0002g08260.t01	Wine grape	plastid	71.17	25.49
KRH36213	Soybean	nucleus	62.58	22.87
KRG92963	Soybean	nucleus	62.58	21.89
AT1G15730.1	Thale cress	plastid	60.12	21.88
AT1G80480.1	Thale cress	plastid	58.9	21.62
PGSC0003DMT400036661	Potato	plastid	60.12	21.59
Solyc03g117430.2.1	Tomato	plastid	60.12	21.35
CDY36582	Canola	plastid	57.67	21.27
CDY33389	Canola	plastid	57.67	21.03
Bra026114.1-P	Field mustard	plastid	57.67	20.98
Bra008470.1-P	Field mustard	plastid	58.28	20.88
Os02t0800000-01	Rice	plastid	57.06	20.81
GSMUA_Achr7P20870_001	Banana	plastid	58.28	20.79
TraesCS6D01G350100.1	Wheat	plastid	55.21	20.64
CDY38672	Canola	plastid	57.67	20.61
KXG31288	Sorghum	plastid	57.06	20.53
TraesCS6B01G402400.1	Wheat	plastid	58.28	20.13
TraesCS6A01G367100.1	Wheat	plastid	55.21	20.04
HORVU6Hr1G086970.1	Barley	plastid	54.6	19.87
Zm00001d018401_P001	Maize	plastid	48.47	18.0
VIT_02s0033g00320.t01	Wine grape	mitochondrion	41.72	16.39
CDY72248	Canola	plastid	11.66	6.05
VIT_03s0110g00560.t01	Wine grape	mitochondrion	4.91	2.96

Protein Annotations

EntrezGene:100853720	wikigene:100853720	Gene3D:3.30.1220.10	MapMan:35.2	ProteinID:CBI36420	ProteinID:CBI36420.3
InterPro:Cbl_biosynth_CobW-like_C	InterPro:CobW-likC_sf	UniProt:D7TZA6	EMBL:FN596494	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR036627	EntrezGene:LOC100853720	wikigene:LOC100853720	PFAM:PF07683	PANTHER:PTHR13748
PANTHER:PTHR13748:SF43	SUPFAM:SSF90002	UniParc:UPI0001BE4662	ArrayExpress:VIT_09s0002g08230	EnsemblPlantsGene:VIT_09s0002g08230	EnsemblPlants:VIT_09s0002g08230.t01
RefSeq:XP_003632839	RefSeq:XP_003632839.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr9:-:8843749..8856331

Molecular Weight (calculated)

18803.9 Da

IEP (calculated)

5.915

GRAVY (calculated)

-0.483

Length

163 amino acids

Sequence
(BLAST)

001: MAYLKRTGFG KVDLDYVLGV GGFDLERIES AVNPEDVKED HVTHGHNHDH DHDYHHHHHH HEHDHGHEHN DHHSYDHTHD PGVSSVSIVC EGSLDLEKAN
101: IWLGTLLLER SEDIYRMKGL LSVQGMDERF VFQVGLMPYI LDFLVSEIIG SGWFKMIFYL SYG

Best Arabidopsis Sequence Match ( AT1G15730.1 )
(BLAST)

001: MATLLKLDIA TTFLAFIVPR ANTSLNHRFA SARLSTATVS LRTKSSSFYS AALYSDSRRR FHSAVASDSS LAVVDDEDIF DVASEILPDN RIPATIITGF
101: LGSGKTTLLN HILTGDHGKR IAVIENEFGE VDIDGSLVAA QTAGAEDIMM LNNGCLCCTV RGDLVRMISE MVQTKKGRFD HIVIETTGLA NPAPIIQTFY
201: AEDEIFNDVK LDGVVTLVDA KHARLHLDEV KPEGYVNEAV EQIAYADRII VNKTDLVGEP ELASVMQRIK TINSMAHMKR TKYGKVDLDY VLGIGGFDLE
301: RIESSVNEEE KEDREGHDDH HHGHDCHDHH NEHEHEHEHE HHHSHDHTHD PGVGSVSIVC EGDLDLEKAN MWLGALLYQR SEDIYRMKGI LSVQDMDERF
401: VFQGVHEIFE GSPDRLWRKD ETRTNKIVFI GKNLNREELE MGFRACLI

Arabidopsis Description

At1g15730/F7H2_7 [Source:UniProtKB/TrEMBL;Acc:Q9LMR1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.