Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 1
- cytosol 2
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY36582 | Canola | plastid | 82.14 | 83.26 |
| CDY33389 | Canola | plastid | 83.04 | 83.22 |
| Bra026114.1-P | Field mustard | plastid | 79.02 | 79.02 |
| AT1G80480.1 | Thale cress | plastid | 73.44 | 74.1 |
| VIT_09s0002g08260.t01 | Wine grape | plastid | 68.97 | 67.91 |
| KRH36213 | Soybean | nucleus | 66.29 | 66.59 |
| TraesCS6D01G350100.1 | Wheat | plastid | 64.51 | 66.28 |
| Solyc03g117430.2.1 | Tomato | plastid | 66.96 | 65.36 |
| Os02t0800000-01 | Rice | plastid | 65.18 | 65.32 |
| TraesCS6A01G367100.1 | Wheat | plastid | 65.18 | 65.03 |
| PGSC0003DMT400036661 | Potato | plastid | 65.85 | 64.98 |
| KXG31288 | Sorghum | plastid | 65.62 | 64.9 |
| GSMUA_Achr7P20870_001 | Banana | plastid | 65.85 | 64.55 |
| HORVU6Hr1G086970.1 | Barley | plastid | 64.51 | 64.51 |
| Zm00001d018401_P001 | Maize | plastid | 61.83 | 63.1 |
| KRG92963 | Soybean | nucleus | 65.4 | 62.88 |
| TraesCS6B01G402400.1 | Wheat | plastid | 65.4 | 62.08 |
| VIT_09s0002g08230.t01 | Wine grape | cytosol | 21.88 | 60.12 |
| AT1G26520.1 | Thale cress | cytosol | 29.69 | 35.56 |
Protein Annotations
| MapMan:15.6.1.2.3.7 | Gene3D:3.30.1220.10 | Gene3D:3.40.50.300 | EntrezGene:838142 | ProteinID:AAF82143.1 | ProteinID:AEE29354.1 |
| EMBL:AF367261 | ArrayExpress:AT1G15730 | EnsemblPlantsGene:AT1G15730 | RefSeq:AT1G15730 | TAIR:AT1G15730 | RefSeq:AT1G15730-TAIR-G |
| EnsemblPlants:AT1G15730.1 | TAIR:AT1G15730.1 | EMBL:AY093965 | Unigene:At.16909 | EMBL:BT000764 | InterPro:Cbl_biosynth_CobW-like_C |
| InterPro:CobW-likC_sf | InterPro:CobW/HypB/UreG_dom | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009570 | InterPro:IPR036627 | RefSeq:NP_173025.1 | InterPro:P-loop_NTPase |
| PFAM:PF02492 | PFAM:PF07683 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR13748 | PANTHER:PTHR13748:SF43 | UniProt:Q9LMR1 | SMART:SM00833 |
| SUPFAM:SSF52540 | SUPFAM:SSF90002 | UniParc:UPI00000AC344 | SEG:seg | : | : |
Description
At1g15730/F7H2_7 [Source:UniProtKB/TrEMBL;Acc:Q9LMR1]
Coordinates
chr1:-:5407401..5410043
Molecular Weight (calculated)
50261.4 Da
IEP (calculated)
5.227
GRAVY (calculated)
-0.331
Length
448 amino acids
Sequence
(BLAST)
(BLAST)
001: MATLLKLDIA TTFLAFIVPR ANTSLNHRFA SARLSTATVS LRTKSSSFYS AALYSDSRRR FHSAVASDSS LAVVDDEDIF DVASEILPDN RIPATIITGF
101: LGSGKTTLLN HILTGDHGKR IAVIENEFGE VDIDGSLVAA QTAGAEDIMM LNNGCLCCTV RGDLVRMISE MVQTKKGRFD HIVIETTGLA NPAPIIQTFY
201: AEDEIFNDVK LDGVVTLVDA KHARLHLDEV KPEGYVNEAV EQIAYADRII VNKTDLVGEP ELASVMQRIK TINSMAHMKR TKYGKVDLDY VLGIGGFDLE
301: RIESSVNEEE KEDREGHDDH HHGHDCHDHH NEHEHEHEHE HHHSHDHTHD PGVGSVSIVC EGDLDLEKAN MWLGALLYQR SEDIYRMKGI LSVQDMDERF
401: VFQGVHEIFE GSPDRLWRKD ETRTNKIVFI GKNLNREELE MGFRACLI
101: LGSGKTTLLN HILTGDHGKR IAVIENEFGE VDIDGSLVAA QTAGAEDIMM LNNGCLCCTV RGDLVRMISE MVQTKKGRFD HIVIETTGLA NPAPIIQTFY
201: AEDEIFNDVK LDGVVTLVDA KHARLHLDEV KPEGYVNEAV EQIAYADRII VNKTDLVGEP ELASVMQRIK TINSMAHMKR TKYGKVDLDY VLGIGGFDLE
301: RIESSVNEEE KEDREGHDDH HHGHDCHDHH NEHEHEHEHE HHHSHDHTHD PGVGSVSIVC EGDLDLEKAN MWLGALLYQR SEDIYRMKGI LSVQDMDERF
401: VFQGVHEIFE GSPDRLWRKD ETRTNKIVFI GKNLNREELE MGFRACLI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.