Factsheet for AT1G26520.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra024711.1-P	Field mustard	cytosol	88.77	91.46
CDY16163	Canola	cytosol	88.5	91.18
CDX85025	Canola	cytosol	87.7	89.62
KRH75019	Soybean	cytosol	70.59	72.33
PGSC0003DMT400072954	Potato	cytosol	69.52	70.08
Solyc05g012460.2.1	Tomato	cytosol	68.98	69.54
GSMUA_Achr6P24600_001	Banana	cytosol	65.24	65.95
HORVU2Hr1G033960.2	Barley	cytosol	63.1	64.84
KXG36628	Sorghum	cytosol	62.83	64.74
KRH70873	Soybean	cytosol	51.34	64.43
TraesCS2D01G188500.1	Wheat	cytosol	62.83	64.21
TraesCS2B01G207100.2	Wheat	cytosol	62.3	64.01
Os07t0598900-01	Rice	cytosol	61.76	63.46
TraesCS2A01G179800.1	Wheat	cytosol	61.5	62.67
Zm00001d022048_P002	Maize	cytosol	61.23	58.57
AT1G15730.1	Thale cress	plastid	35.56	29.69
AT1G80480.1	Thale cress	plastid	34.76	29.28

Protein Annotations

Gene3D:3.30.1220.10	Gene3D:3.40.50.300	MapMan:35.2	EntrezGene:839192	UniProt:A0A178W5Z2	ProteinID:AEE30700.1
ArrayExpress:AT1G26520	EnsemblPlantsGene:AT1G26520	RefSeq:AT1G26520	TAIR:AT1G26520	RefSeq:AT1G26520-TAIR-G	EnsemblPlants:AT1G26520.1
TAIR:AT1G26520.1	Unigene:At.49920	EMBL:BT022099	InterPro:Cbl_biosynth_CobW-like_C	InterPro:CobW-likC_sf	InterPro:CobW/HypB/UreG_dom
GO:GO:0003674	InterPro:IPR036627	RefSeq:NP_173974.3	ProteinID:OAP12803.1	InterPro:P-loop_NTPase	PFAM:PF02492
PFAM:PF07683	PO:PO:0000013	PO:PO:0000037	PO:PO:0000084	PO:PO:0000230	PO:PO:0000293
PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064
PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611
PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010
PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137
PO:PO:0025022	PANTHER:PTHR13748	PANTHER:PTHR13748:SF31	UniProt:Q500W8	SMART:SM00833	SUPFAM:SSF52540
SUPFAM:SSF90002	UniParc:UPI000050D3A4	SEG:seg	:	:	:

Description

At1g26520 [Source:UniProtKB/TrEMBL;Acc:Q500W8]

Coordinates

chr1:-:9163211..9165900

Molecular Weight (calculated)

42015.0 Da

IEP (calculated)

4.512

GRAVY (calculated)

-0.243

Length

374 amino acids

Sequence
(BLAST)

001: MLKEEAEGVK MEDDDEEPPM AVQIHPDVSV GKVHSSSDTV SVGVSVITGY LGAGKSTLVN YILNGKHGKR IAVILNEFGE EIGVERAMIN EGEEGAIVEE
101: WVELANGCVC CTVKHSLVQA LEQLVQRKDR LDHILLETTG LANPAPLASI LWLDDQLESE VKLDCIVTVV DAKNLRFQLN ERRDSSSFPE AFNQIAFADT
201: IIMNKVDLIS QEESDELEKE IHSINSLANV IRSVRCQVDL SNILNCQAYD STHVSRLESL LEANKSLTTT DLHDSGVRTL CISEPQPINL DKVRLWLEEI
301: LWDKKSEMDV YRCKAVLSIQ NSDQMHILQA VRDIYEIVPA RKWSEEENRT NKIVFIGHKL DEEVLRSGLR DCRP

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.