Factsheet for Solyc05g012460.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400072954	Potato	cytosol	97.57	97.57
KRH75019	Soybean	cytosol	71.43	72.6
Bra024711.1-P	Field mustard	cytosol	69.27	70.8
CDY16163	Canola	cytosol	69.0	70.52
CDX85025	Canola	cytosol	68.73	69.67
AT1G26520.1	Thale cress	cytosol	69.54	68.98
GSMUA_Achr6P24600_001	Banana	cytosol	67.92	68.11
KRH70873	Soybean	cytosol	52.29	65.1
KXG36628	Sorghum	cytosol	62.8	64.19
Os07t0598900-01	Rice	cytosol	62.26	63.46
HORVU2Hr1G033960.2	Barley	cytosol	62.26	63.46
TraesCS2B01G207100.2	Wheat	cytosol	62.26	63.46
TraesCS2D01G188500.1	Wheat	cytosol	61.46	62.3
TraesCS2A01G179800.1	Wheat	cytosol	61.19	61.85
Zm00001d022048_P002	Maize	cytosol	61.19	58.06
Solyc03g117430.2.1	Tomato	plastid	33.15	26.8
Solyc08g076020.2.1	Tomato	nucleus	32.61	14.24

Protein Annotations

EnsemblPlants:Solyc05g012460.2.1	EnsemblPlantsGene:Solyc05g012460.2	Gene3D:3.30.1220.10	Gene3D:3.40.50.300	InterPro:Cbl_biosynth_CobW-like_C	InterPro:CobW-likC_sf
InterPro:CobW/HypB/UreG_dom	InterPro:IPR036627	InterPro:P-loop_NTPase	PANTHER:PTHR13748	PANTHER:PTHR13748:SF31	PFAM:PF02492
PFAM:PF07683	SMART:SM00833	SUPFAM:SSF52540	SUPFAM:SSF90002	UniParc:UPI000276569E	UniProt:K4BXW9
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr5:-:5699530..5703203

Molecular Weight (calculated)

41741.2 Da

IEP (calculated)

4.701

GRAVY (calculated)

-0.133

Length

371 amino acids

Sequence
(BLAST)

001: MENSDEEPPL AVEINDAVNS NQLTKSSKLP PVGVTVITGY LGSGKSTLIN YILKTQHGKK IAVILNEFGE ELGVERAMIN EGEEGDLVEE WVELANGCIC
101: CTVKHSLVQA LEQLVQRKER LDHILLETTG LANPAPLASV LWLDDQLESD VRLDSIITVV DAKNLRYQLK PNPDSSSFPE AYLQIAFADV IILNKVDLIS
201: LDDSGAVLEE LVKEIRDVNS LANIIHSVRC QVDLSKILNC QAYDPTHAAH LEALLKENKS LTTKGLHDSE VRTLCICDAQ QIDLDKVRIW LEELLWDKKY
301: GMDVYRCKGI LRVRNSDELH TLQGVREIYE IVPSRKWRNE EIQMNKIVFI GRFLNEEILL HSLHTCIVGT N

Best Arabidopsis Sequence Match ( AT1G26520.1 )
(BLAST)

001: MLKEEAEGVK MEDDDEEPPM AVQIHPDVSV GKVHSSSDTV SVGVSVITGY LGAGKSTLVN YILNGKHGKR IAVILNEFGE EIGVERAMIN EGEEGAIVEE
101: WVELANGCVC CTVKHSLVQA LEQLVQRKDR LDHILLETTG LANPAPLASI LWLDDQLESE VKLDCIVTVV DAKNLRFQLN ERRDSSSFPE AFNQIAFADT
201: IIMNKVDLIS QEESDELEKE IHSINSLANV IRSVRCQVDL SNILNCQAYD STHVSRLESL LEANKSLTTT DLHDSGVRTL CISEPQPINL DKVRLWLEEI
301: LWDKKSEMDV YRCKAVLSIQ NSDQMHILQA VRDIYEIVPA RKWSEEENRT NKIVFIGHKL DEEVLRSGLR DCRP

Arabidopsis Description

At1g26520 [Source:UniProtKB/TrEMBL;Acc:Q500W8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.