CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH56887	Soybean	mitochondrion	80.41	86.98
VIT_01s0127g00660.t01	Wine grape	cytosol	60.82	65.93
Bra012965.1-P	Field mustard	mitochondrion	57.35	58.18
CDY68950	Canola	mitochondrion	57.14	57.97
CDY02152	Canola	mitochondrion	56.73	57.56
AT5G61370.1	Thale cress	mitochondrion	56.73	57.08
Os10t0422300-00	Rice	mitochondrion	39.39	40.21
TraesCS3B01G419500.1	Wheat	mitochondrion	39.8	39.71
TraesCS3A01G389400.1	Wheat	mitochondrion	39.59	39.51
Zm00001d032934_P001	Maize	mitochondrion	40.0	39.28
TraesCS3D01G380400.1	Wheat	mitochondrion	38.78	38.7
GSMUA_Achr4P18270_001	Banana	mitochondrion	32.86	36.18
HORVU4Hr1G025220.1	Barley	cytosol, plastid	26.73	35.31
KXG38503	Sorghum	mitochondrion	38.98	28.3
HORVU3Hr1G081750.4	Barley	mitochondrion	39.18	28.28
KRG92684	Soybean	mitochondrion, plastid	23.27	22.4
KRH34092	Soybean	mitochondrion	22.65	21.81

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:100814450	MapMan:35.1	EMBL:ACUP02010348	EnsemblPlantsGene:GLYMA_17G102300	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0004518	GO:GO:0004519	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009451	GO:GO:0009987	GO:GO:0016787	GO:GO:0043231	GO:GO:0090305
InterPro:IPR002885	InterPro:IPR011990	UniProt:K7MKY1	EnsemblPlants:KRH03514	ProteinID:KRH03514	ProteinID:KRH03514.1
ProteinID:KRH03515.1	PFAM:PF01535	PFAM:PF13041	PFAM:PF13812	PFscan:PS51375	PANTHER:PTHR24015
PANTHER:PTHR24015:SF620	InterPro:Pentatricopeptide_repeat	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	UniParc:UPI0002961F11	SEG:seg

Description

hypothetical protein

Coordinates

chr17:+:8024107..8027410

Molecular Weight (calculated)

55910.5 Da

IEP (calculated)

9.830

GRAVY (calculated)

-0.350

Length

490 amino acids

Sequence
(BLAST)

001: MRFKMHAMLK PAWKRFWLQN MRTHNLQILP FSHYSTLQSM SVHPQLQELC SIVMSTVGGL DELELSLNKF KDSLTSSLVA QAIDSSKHEA QTRRLLRFFL
101: WSCKNLSHRL EDKDYNHALR VFAEKKDYTA MDILMGDLKK EGRAMDAETF SLVAENLVKL GKEDEALGIF KNLDKYKCSI DEFTVTAIVN ALCSKGHGKR
201: AEGVVWHHND KITGTKPCIY RSLLYGWSVQ RNVKEARRII KEMKSNGVIP DLLCYNTFLR CLCERNLRHN PSGLVPEALN VMMEMKSHNV FPTSISYNIL
301: LSCLGKTRRV KESCQILETM KISGCDPDWV SYYLVAKVLF LSGRFGKGKE MVDQMIGKGL VPNHKFYYSL IGILCGVERV NYALELFEKM KKSSMGGYGP
401: VYDVLIPKLC RGGDFEKGRE LWDEASGMGI TLQCSEDVLD PSITEVYKPT RPEKSSHVDS SRAKSPQKLT KFSGKMKMRK KTAAMKKKKK

Best Arabidopsis Sequence Match ( AT5G61370.1 )
(BLAST)

001: MMSTTVRLNR FTYLTSTAKL TRYFCSHHLV DRSETALHEV IRIVSSPVGG LDDLEENLNQ VSVSPSSNLV TQVIESCKNE TSPRRLLRFF SWSCKSLGSS
101: LHDKEFNYVL RVLAEKKDHT AMQILLSDLR KENRAMDKQT FSIVAETLVK VGKEEDAIGI FKILDKFSCP QDGFTVTAII SALCSRGHVK RALGVMHHHK
201: DVISGNELSV YRSLLFGWSV QRNVKEARRV IQDMKSAGIT PDLFCFNSLL TCLCERNVNR NPSGLVPEAL NIMLEMRSYK IQPTSMSYNI LLSCLGRTRR
301: VRESCQILEQ MKRSGCDPDT GSYYFVVRVL YLTGRFGKGN QIVDEMIERG FRPERKFYYD LIGVLCGVER VNFALQLFEK MKRSSVGGYG QVYDLLIPKL
401: CKGGNFEKGR ELWEEALSID VTLSCSISLL DPSVTEVFKP MKMKEEAAMV DRRALNLKIH ARMNKTKPKL KLKPKRRSKT KKKNLQH

Arabidopsis Description

Pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FLJ6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.